Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)

Ying Gu; Cuiyun Lu; Xiaofeng Zhang; Chao Li; Juhua Yu; Xiaowen Sun

doi:10.1007/s00343-015-4207-6

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Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)

OriginalPaper | Updated：2023-05-16

- Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)
- Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)
- 海洋湖沼学报（英文） 2015年33卷第3期页码：636-649
- Affiliations：
  
  1. Heilongjiang River Fisheries Research Institute Chinese Academy of Fishery Sciences
  2. College of Fisheries and Life Sciences Shanghai Ocean University
  3. Freshwater Fisheries Research Center Chinese Academy of Fishery Sciences
- Author bio：
- Funds：
  
  Supported by the Special Scientific Research Funds for Central Non-Profit Institutes, Chinese Academy of Fishery Sciences (No. 2014A05CG01), the National High Technology Research and Development Program of China (No. 2011AA100402-5), and the China Ministry of Agriculture “948” Program (No. 2011-G12);GU Ying and LU Cuiyun contributed equally to this work.
- DOI：10.1007/s00343-015-4207-6
  中图分类号：
- 网络首发：2015-01-22，
  
  纸质出版：2015
- Accepted：
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Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)[J]. 海洋湖沼学报（英文）, 2015,33(3):636-649.

Gu, Y., Lu, C., Zhang, X. et al. Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)., Chin. J. Ocean. Limnol. 33, 636–649 (2015). https://doi.org/10.1007/s00343-015-4207-6
Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)[J]. 海洋湖沼学报（英文）, 2015,33(3):636-649. DOI： 10.1007/s00343-015-4207-6.

Gu, Y., Lu, C., Zhang, X. et al. Genetic mapping and QTL analysis for body weight in Jian carp (Cyprinus carpio var. Jian) compared with mirror carp (Cyprinus carpio L.)., Chin. J. Ocean. Limnol. 33, 636–649 (2015). https://doi.org/10.1007/s00343-015-4207-6 DOI：

摘要

Abstract

We report the genetic linkage map of Jian carp (Cyprinus carpio var. Jian). An F1 population comprising 94 Jian carp individuals was mapped using 254 microsatellite markers. The genetic map spanned 1 381.592 cM and comprised 44 linkage groups

with an average marker distance of 6.58 cM. We identified eight quantitative trait loci (QTLs) for body weight (BW) in seven linkage groups

explaining 12.6% to 17.3% of the phenotypic variance. Comparative mapping was performed between Jian carp and mirror carp (Cyprinus carpio L.)

which both have 50 chromosomes. One hundred and ninety-eight Jian carp marker loci were found in common with the mirror carp map

with 186 (93.94%) showing synteny. All 44 Jian carp linkage groups could be one-to-one aligned to the 44 mirror carp linkage groups

mostly sharing two or more common loci. Three QTLs for BW in Jian carp were conserved in mirror carp. QTL comparison suggested that the QTL confidence interval in mirror carp was more precise than the homologous interval in Jian carp

which was contained within the QTL interval in Jian carp. The syntenic relationship and consensus QTLs between the two varieties provide a foundation for genomic research and genetic breeding in common carp.

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references

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