

FOLLOWUS
1. Key Laboratory of Marine Chemistry Theory and Technology Ministry of Education
2. State Oceanic Administration
3. Key Laboratory of Marine Environment and Ecology Ministry of Education
网络首发:2011-08-08,
纸质出版:2011
Scan QR Code
Classification of marine diatoms using pigment ratio suites[J]. 海洋湖沼学报(英文), 2011,29(5):1075-1085.
Yao, P., Yu, Z., Deng, C. et al. Classification of marine diatoms using pigment ratio suites., Chin. J. Ocean. Limnol. 29, 1075–1085 (2011). https://doi.org/10.1007/s00343-011-0202-8
Classification of marine diatoms using pigment ratio suites[J]. 海洋湖沼学报(英文), 2011,29(5):1075-1085. DOI: 10.1007/s00343-011-0202-8.
Yao, P., Yu, Z., Deng, C. et al. Classification of marine diatoms using pigment ratio suites., Chin. J. Ocean. Limnol. 29, 1075–1085 (2011). https://doi.org/10.1007/s00343-011-0202-8 DOI:
Diatoms are widely distributed in many temperate areas and some species frequently form extensive blooms in spring. Hence
monitoring the variations of specific genera or species of diatoms is necessary for studying phytoplankton population dynamics in marine ecosystems. To test whether pigment ratios can be used to identify diatoms at a below-class taxonomic level
we analyzed 14 species/strains of diatoms isolated from Chinese seas using high performance liquid chromatography (HPLC). We normalized all pigment concentrations to total chlorophyll a to calculate the ratios of pigment to chlorophyll a
and calculated the ratios between accessory pigments (or pigment sums). Cluster analysis indicated that these diatoms could be classified into four clusters in terms of three accessory pigment ratios: chlorophyll c 2: chlorophyll c 1
fucoxanthin:total chlorophyll c and diadinoxanthin:diatoxanthin. The classification results matched well with those of biological taxonomy. To test the stability of the classification
pigment data from one species
cultured under different light intensities
and five new species/strains were calculated and used for discriminant analysis. The results show that the classification of diatom species using pigment ratio suites was stable for the variations of pigment ratios of species cultured in different light intensities. The introduction of new species
however
may confuse the classification within the current scheme. Classification of marine diatoms using pigment ratio suites is potentially valuable for the fine chemotaxonomy of phytoplankton at taxonomic levels below class and would advance studies on phytoplankton population dynamics and marine ecology.
Airs R L, Atkinson J E, Keely B J. 2001. Development and application of a high resolution liquid chromatographic method for the analysis of complex pigment distributions. J. Chromatogr. A, 917: 169–179.
Airs R L, Llewellyn C A. 2006. Improved detection and characterization of fucoxanthin-type carotenoids: novel pigments in Emiliania huxleyi (Prymnesiophyceae). J. Phycol., 42: 391–399.
Bopp L, Aumont O, Cadule P, Alvain S, Gehlen M. 2005. Response of diatoms distribution to global warming and potential implications: a global model study. Geophys. Res. Lett., 32: L19606.
Deng C M, Yao P, Liu S X, Yu Z G. 2010. Advances in pigment analysis and chemotaxonomy of marine phytoplankton. J. Ocean Univ. China, 40(4): 91–98. (in Chinese with English abstract)
Fujiki T, Taguchi S. 2001. Relationship between light absorption and the xanthophyll-cycle pigments in marine diatoms. Plankton Biol. Ecol., 48: 96–103.
Goericke R, Montoya J P. 1998. Estimating the contribution of microalgal taxa to chlorophyll a in the field-variations of pigment ratios under nutrient- and light-limited growth. Mar. Ecol. Prog. Ser., 169: 97–112.
Havskum H, Schluter L, Scharek R, Berdalet E, Jacquet S. 2004. Routine quantification of phytoplankton groups-microscopy or pigment analyses? Mar. Ecol. Prog. Ser., 273: 31–42.
Henriksen P, Riemann B, Kaas H, Sørensen H M, Sørensen H L. 2002. Effects of nutrient-limitation and irradiance on marine phytoplankton pigments. J. Plankton Res., 24(9): 835–858.
Hou J J, Huang B Q, Cao Z R, Chen J X, Hong H S. 2007. Effects of nutrient limitation on pigments in Thalassiosira weissflogii and Prorocentrum donghaiense. J. Integr. Plant Biol., 49(5): 1–5.
Jeffrey S W, Mantoura R F C, Wright S W. 1997. Phytoplankton Pigments in Oceanography. UNESCO Publishing, Paris. 667p.
Jeffrey S W, Wright S W. 2006. Photosynthetic pigments in marine microalgae: insights from cultures and the sea. In: Subba Rao D V ed. Algal Cultures, Analogues of Blooms and Applications. Science Publishers, Enfield, NH, USA. p.33–90.
Jeffrey S W. 1972. Preparation and some properties of crystalline chlorophyll c 1 and c 2 from marine algae. Biochim. Biophys. Acta, 279: 15–33.
Latasa M. 1995. Pigment composition of Heterocapsa sp. and Thalassiosira weissflogii growing in batch cultures under different irradiances. Sci. Mar., 59(1): 25–37.
Latasa M. 2007. Improving estimations of phytoplankton class abundances using CHEMTAX. Mar. Ecol. Prog. Ser., 329: 13–21.
Llewellyn A, Gibb S W. 2000. Intra-class variability in the carbon, pigment and biomineral content of prymnesiophytes and diatoms. Mar. Ecol. Prog. Ser., 193: 33–44.
Mackey M D, Mackey D J, Higgins H W, Wright S W. 1996. CHEMTAX—a program for estimating class abundances from chemical markers: application to HPLC measurements of phytoplankton. Mar. Ecol. Prog. Ser., 144: 265–283.
Örnólfsdóttir E B, Pinckney J L, Tester P A. 2003. Quantification of the relative abundance of the toxic dinoflagellate, Karenia brevis (Dinophyta) using unique photopigments. J. Phycol., 39: 449–457.
Rodríguez F, Chauton M, Johnsen G, Andresen K, Olsen LM, Zapata M. 2006. Photoacclimation in phytoplankton: implications for biomass estimates, pigment functionality and chemotaxonomy. Mar. Biol., 148(5): 963–971.
Rodríguez J, Jiménez-Gómez F, Blanco J M, Figueroa F L. 2002. Physical gradients and spatial variability of the size structure and composition of phytoplankton in the Gerlache Strait (Antartica). Deep Sea Res. II, 49: 693–706.
Schlüter L, Møhlenberg F, Havskum H, Larsen S. 2000. The use of phytoplankton pigments for identifying and quantifying phytoplankton groups in coastal areas: testing the influence of light and nutrients on pigment/chlorophyll a ratios. Mar. Ecol. Prog. Ser., 192: 49–63.
Seoane S, Zapata M, Orive E. 2009. Growth rates and pigment patterns of haptophytes isolated from estuarine waters. J. Sea Res., 62: 286–294.
Stauber J L, Jeffrey S W. 1988. Photosynthetic pigments in 51 species of marine diatoms. J. Phycol., 24: 158–172.
Struyf E, Smis A, Van Damme S, Meire P, Conley D J. 2009. The global biogeochemical silicon cycle. Silicon, 1(4): 207–213.
Tomas C. 1997. Identifying Marine Phytoplankton. Academic Press, San Diego, USA. 858p.
Ulrich R M, Casper E T, Campbell L, Richardson B, Heil C A, Paul J H. 2010. Detection and quantification of Karenia mikimotoi using real-time nucleic acid sequencebased amplication with internal control RNA(ICNASBA). Harmful Algae, 9: 116–122.
Wilson D P. 1946. The triradiate and other forms of Nitzschia closterium (Ehrenberg) Wm. Smith, forma Minutissima of Allen and Nelson. J. Mar. Biol. Assoc. UK, 26: 235–270.
Wright S W, Jeffrey S W. 2006. Pigment markers for phytoplankton production. In: Volkman J K ed. Marine Organic Matter: Biomarkers, Isotopes and DNA. The Handbook of Environmental Chemistry. Vol. 2, Part 2N. Springer Verlag, Basel. p.71–104.
Yao P, Yu Z G, Deng C M, Liu S X, Zhen Y. 2010. Spatialtemporal distribution of phytoplankton pigments in relation to nutrient status in Jiaozhou Bay, China. Estuar. Coast. Shelf Sci., 89(3): 234–244.
Yao P, Yu Z G, Deng C M. 2006. Pigment signatures of some diatoms isolated from China seas. Acta. Oceano. Sin., 25(1): 108–118.
Yao P. 2005. Pigment Analysis and Chemotaxonomy of Phytoplankton in Jiaozhou Bay, China. Ph. D. Thesis, Ocean University China. (in Chinese with English abstract)
Yu Z G, Deng C M, Yao P, Zhen Y, Qian S B. 2007. Prasinoxanthin-containing Prasinophyceae discovered in Jiaozhou Bay, China. J. Integr. Plant Biol., 49(4): 497–506.
Zapata M, Garrido J L. 1991. Influence of injection conditions in reversed phase high-performance liquid chromatography of chlorophylls and carotenoids. Chromatographia, 31: 589–594.
Zapata M, Jeffrey S W, Wright S W, Rodríguez F, Garrido J L, Clementson L. 2004. Photosynthetic pigments in 37 species (65 strains) of Haptophyta: implications for oceanography and chemotaxonomy. Mar. Ecol. Prog. Ser., 270: 83–102.
Zapata M, Rodríguez F, Garrido J L. 2000. Separation of chlorophylls and carotenoids from marine phytoplankton: A new HPLC method using a reversed phase C8 column and pyridine-containing mobile phases. Mar. Ecol. Prog. Ser., 195: 29–45.
Zhen Y, Mi T Z, Yu Z G. 2009. Detection of several harmful algal species by sandwich hybridization integrated with a nuclease protection assay. Harmful Algae, 8: 651–657.
0
浏览量
0
Downloads
6
CSCD
关联资源
相关文章
相关作者
相关机构

京公网安备11010802024621