Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides

Fang Lü; Guangce Wang

doi:10.1007/s00343-011-0084-9

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Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides

OriginalPaper | Updated：2023-05-16

- Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides
- Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides
- 海洋湖沼学报（英文） 2011年29卷第5期页码：922-929
- Affiliations：
  
  Institute of Oceanology Chinese Academy of Sciences
- Author bio：
- Funds：
  
  Supported by the National Natural Science Foundation of China (Nos. 30970302, 40806063, 30830015, B49082401)
- DOI：10.1007/s00343-011-0084-9
  中图分类号：
- 网络首发：2011-08-08，
  
  纸质出版：2011
- Accepted：
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Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides[J]. 海洋湖沼学报（英文）, 2011,29(5):922-929.

Lü, F., Wang, G. Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides, ., Chin. J. Ocean. Limnol. 29, 922–929 (2011). https://doi.org/10.1007/s00343-011-0084-9
Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides[J]. 海洋湖沼学报（英文）, 2011,29(5):922-929. DOI： 10.1007/s00343-011-0084-9.

Lü, F., Wang, G. Sequence and phylogenetic analyses of the chloroplast 16S rRNA, tufA, and rbcL genes from Bryopsis hypnoides, ., Chin. J. Ocean. Limnol. 29, 922–929 (2011). https://doi.org/10.1007/s00343-011-0084-9 DOI：

摘要

Abstract

Using shotgun sequencing data

the complete sequences of chloroplast 16S rRNA and tufA genes were acquired from native specimens of Bryopsis hypnoides (Qingdao

China). There are two group I introns in the 16S rRNA gene

which is structurally similar to that of Caulerpa sertularioides (Bryopsidales

Chlorophyta). The chloroplast-encoded tufA gene sequence is 1 230 bp long

very AT-rich (61.5%)

and is similar to previously published 16S rRNA sequences of bryopsidinean algae. Phylogenetic analyses based on chloroplast 16S rRNA and tufA gene sequence data support previous hypotheses that the Bryopsidineae

Halimedineae

and Ostreobidineae are three distinct lineages. These results also confirmed the exclusion of Avrainvillea from the family Udoteaceae. Phylogenetic analyses inferred that the genus Bryopsis as sister to Derbesia; however

this clade lacked robust nodal support. Moreover

the phylogenetic tree inferred from rbcL GenBank sequences

combined with the geographical distributions of Bryopsis species

identified a strongly supportive clade for three differently distributed Asian Bryopsis species. The preliminary results suggesting that these organisms are of distinct regional endemism.

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references

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