Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters

Xianghai Tang; Rencheng Yu; Qingchun Zhang; Yunfeng Wang; Tian Yan; Mingjiang Zhou

doi:10.1007/s00343-010-9288-7

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Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters

OriginalPaper | Updated：2023-05-16

- Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters
- Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters
- 海洋湖沼学报（英文） 2010年28卷第2期页码：323-328
- Affiliations：
  
  1. Key Laboratory of Marine Ecology and Environmental Sciences Institute of Oceanology Chinese Academy of Sciences
  2. Graduate School of Chinese Academy of Sciences
- Author bio：
- Funds：
  
  Supported by the Knowledge Innovation Program of Chinese Academy of Sciences (No. KZCX2-YW-208) and National Natural Science Foundation of China (No. 40676072)
- DOI：10.1007/s00343-010-9288-7
  中图分类号：
- 网络首发：2010-03-20，
  
  纸质出版：2010
- Accepted：
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Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters[J]. 海洋湖沼学报（英文）, 2010,28(2):323-328.

Tang, X., Yu, R., Zhang, Q. et al. Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters., Chin. J. Ocean. Limnol. 28, 323–328 (2010). https://doi.org/10.1007/s00343-010-9288-7
Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters[J]. 海洋湖沼学报（英文）, 2010,28(2):323-328. DOI： 10.1007/s00343-010-9288-7.

Tang, X., Yu, R., Zhang, Q. et al. Molecular phylogenetic analysis of dinoflagellate Scrippsiella trochoidea isolated from the East Asian waters., Chin. J. Ocean. Limnol. 28, 323–328 (2010). https://doi.org/10.1007/s00343-010-9288-7 DOI：

摘要

Abstract

Previous studies found intraspecific diversity in Scrippsiella trochoidea A. R. Loeblich III

a widely distributed calcareous cyst-producing dinoflagellate. In this study

three strains (ST-1

ST-D6 and ST-K) of S. trochoidea isolated from the East Asian waters were studied

together with other geographical strains

to resolve their phylogenetic relationships. For the three East Asian isolates

two highly diverse regions of nuclear-encoded ribosomal DNA (rDNA)

the 5.8S rDNA and its flanking internal transcribed spacers 1 and 2

and the 5′ portion of the large-subunit rDNA (encompassing the “D1“ and “D2” domains) were sequenced. Homologous sequences from other geographical isolates were selected from the GenBank database and the phylogenetic relationships were inferred from the molecular data of these strains. Strains of S. trochoidea were found to cluster into three major clades (STR1

STR2 and STR3)

as reported in previous studies. Two of the three strains ST-1 and ST-K

were grouped in clade STR2

the other strain

ST-D6

belonged to clade STR3. The intraspecific diversity of S. trochoidea in East Asian waters makes it necessary to carry out phylogenetic investigations in combination with data of biogeography

population dynamics

and life cycle on the ecophysiology of a region.

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references

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