Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)

Yuhui Li; Jianting Yao; Tianxiang Gao; Delin Duan

doi:10.1007/s00343-007-0059-z

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Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)

OriginalPaper | Updated：2023-05-16

- Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)
- Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)
- 海洋湖沼学报（英文） 2007年25卷第1期页码：59-66
- Affiliations：
  
  1. Department of Aquaculture Ocean University of China
  2. Institute of Oceanology Chinese Academy of Sciences
  3. Graduate School of the Chinese Academy of Sciences
- Author bio：
- Funds：
  
  Supported by the NSFC (No. 40376049 and No. 30500383) and Shandong Agricultural Seed Stock Breeding Project and Knowledge Innovation Program of Chinese Academy of Sciences (KSCX2-YW-N-47-02).
- DOI：10.1007/s00343-007-0059-z
  中图分类号：
- 纸质出版：2007
- Accepted：
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Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)[J]. 海洋湖沼学报（英文）, 2007,25(1):59-66.

Li, Y., Yao, J., Gao, T. et al. Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)., Chin. J. Ocean. Limnol. 25, 59–66 (2007). https://doi.org/10.1007/s00343-007-0059-z
Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)[J]. 海洋湖沼学报（英文）, 2007,25(1):59-66. DOI： 10.1007/s00343-007-0059-z.

Li, Y., Yao, J., Gao, T. et al. Long interspersed elements in three species of Gracilaria (Gracilariaceae, Rhodophyta)., Chin. J. Ocean. Limnol. 25, 59–66 (2007). https://doi.org/10.1007/s00343-007-0059-z DOI：

摘要

Abstract

In order to find out whether long interspersed elements (LINEs) existed in macro-algae genomes or not

we tested the LINE homologues in representative families (species): Gracilaria (G. eucheumoides Harv.

G. tenuistipitata Chang et Xia

and G. textorii (Sur) De-Toni)

Laminaria (L. longissima Miyabe and L. japonica Aresch.)

and Ulva (U. lactuca L. and U. pertusa Kjellm.) during 2004 to 2005. Polymerase Chain Reaction (PCR) was carried out with degenerate oligonucleotide primers designed from LINEs of rice homologues and Cin4 of maize. Cloning and nucleotide sequencing of the PCR products revealed that 4 clones that derived from 3 species of Gracilaria have LINE homologues. The nucleotide sequences of the 4 LINE homologues diverged greatly

but the amino acid sequences deduced from them were relatively conserved. The endonuclease regions of the LINE homologues greatly diverged from that of other plants

but they had closer phylogenetic relationship to Zepp elements in Chlorella sp.

which indicated that sequence divergence by vertical transmission has been a major influence on the evolution of algal LINEs.

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references

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