Population genetics of Sargassum horneri (Fucales, Phaeophyta) in China revealed by ISSR and SRAP markers

Shenhui Yu; Zhuo Chong; Fengjuan Zhao; Jianting Yao; Delin Duan

doi:10.1007/s00343-013-2064-8

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Population genetics of Sargassum horneri (Fucales, Phaeophyta) in China revealed by ISSR and SRAP markers

Updated：2023-05-16

- Population genetics of Sargassum horneri (Fucales, Phaeophyta) in China revealed by ISSR and SRAP markers
- Journal of Oceanology and Limnology Vol. 31, Issue 3, Pages: 609-616(2013)
- Affiliations：
  
  1. Key Laboratory of Experimental Marine Biology Institute of Oceanology Chinese Academy of Sciences
  2. Graduate University of Chinese Academy of Sciences
  3. Shandong Key Laboratory of Eco-environmental Science for Yellow River Delta Binzhou University
- Author bio：
- Funds：
- DOI：10.1007/s00343-013-2064-8
  CLC：
- Online First：08 May 2013，
  
  Published：2013
- Accepted：
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Yu, S., Chong, Z., Zhao, F. et al. Population genetics of Sargassum horneri (Fucales, Phaeophyta) in China revealed by ISSR and SRAP markers., Chin. J. Ocean. Limnol. 31, 609–616 (2013). https://doi.org/10.1007/s00343-013-2064-8
DOI：

Yu, S., Chong, Z., Zhao, F. et al. Population genetics of Sargassum horneri (Fucales, Phaeophyta) in China revealed by ISSR and SRAP markers., Chin. J. Ocean. Limnol. 31, 609–616 (2013). https://doi.org/10.1007/s00343-013-2064-8 DOI：

摘要

Abstract

Sargassum horneri is a common brown macro-alga that is found in the inter-tidal ecosystems of China. To investigate the current status of seaweed resources and provide basic data for its sustainable development

ISSR (inter simple sequence repeat) and SRAP (sequence related amplified polymorphism) markers were used to analyze the population genetics among nine natural populations of S. horneri. The nine studied populations were distributed over 2 000 km from northeast to south China. The percentage of polymorphic loci P % (ISSR

99.44%; SRAP

100.00%)

Nei’s genetic diversity H (ISSR

0.107–0.199; SRAP

0.100–0.153)

and Shannon’s information index I (ISSR

0.157–0.291; SRAP

0.148–0.219) indicated a fair amount of genetic variability among the nine populations. Moreover

the high degree of gene differentiation G st (ISSR

0.654; SRAP

0.718) and low gene flow N m (ISSR

0.265; SRAP

0.196) implied that there was significant among-population differentiation

possibly as a result of habitat fragmentation. The matrices of genetic distances and fixation indices (F st) among the populations correlated well with their geographical distribution (Mantel test R =0.541 5

0.541 8; P =0.005 0

0.002 0 and R =0.728 6

0.641 2; P =0.001 0

0.001 0

respectively); the Rongcheng population in the Shandong peninsula was the only exception. Overall

the genetic differentiation agreed with the geographic isolation. The fair amount of genetic diversity that was revealed in the S. horneri populations in China indicated that the seaweed resources had not been seriously affected by external factors.

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references

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