Lagrangian model of zooplankton dispersion: numerical schemes comparisons and parameter sensitivity tests

Zhongfeng Qiu; Andrea M. Doglioli; Yijun He; Francois Carlotti

doi:10.1007/s00343-011-0015-9

Your Location：

Home >

Browse articles >

Lagrangian model of zooplankton dispersion: numerical schemes comparisons and parameter sensitivity tests

Updated：2023-05-16

- Lagrangian model of zooplankton dispersion: numerical schemes comparisons and parameter sensitivity tests
- Journal of Oceanology and Limnology Vol. 29, Issue 2, Pages: 438-445(2011)
- Affiliations：
  
  1. Key Laboratory of Ocean Circulation and Waves Institute of Oceanology CAS
  2. Laboratoire d’Océanographie Physique et Biogéochimie Aix Marseille Université CNRS UMR,6535
- Author bio：
- Funds：
- DOI：10.1007/s00343-011-0015-9
  CLC：
- Online First：02 March 2011，
  
  Published：2011
- Accepted：
Scan QR Code
Qiu, Z., Doglioli, A.M., He, Y. et al. Lagrangian model of zooplankton dispersion: numerical schemes comparisons and parameter sensitivity tests., Chin. J. Ocean. Limnol. 29, 438–445 (2011). https://doi.org/10.1007/s00343-011-0015-9
DOI：

Qiu, Z., Doglioli, A.M., He, Y. et al. Lagrangian model of zooplankton dispersion: numerical schemes comparisons and parameter sensitivity tests., Chin. J. Ocean. Limnol. 29, 438–445 (2011). https://doi.org/10.1007/s00343-011-0015-9 DOI：

摘要

Abstract

This paper presents two comparisons or tests for a Lagrangian model of zooplankton dispersion: numerical schemes and time steps. Firstly

we compared three numerical schemes using idealized circulations. Results show that the precisions of the advanced Adams-Bashfold-Moulton (ABM) method and the Runge-Kutta (RK) method were in the same order and both were much higher than that of the Euler method. Furthermore

the advanced ABM method is more efficient than the RK method in computational memory requirements and time consumption. We therefore chose the advanced ABM method as the Lagrangian particle-tracking algorithm. Secondly

we performed a sensitivity test for time steps

using outputs of the hydrodynamic model

Symphonie. Results show that the time step choices depend on the fluid response time that is related to the spatial resolution of velocity fields. The method introduced by Oliveira et al. in 2002 is suitable for choosing time steps of Lagrangian particle-tracking models

at least when only considering advection.

关键词

Keywords

references

Batchelder H P, Edwards C A, Powell T M. 2002. Individual-based models of copepod populations in coastal upwelling regions: implications of physiologically and environmentally influenced diel vertical migration on demographic success and nearshore retention. Prog. Oceanogr., 53: 307–333.

Bennett J R, Clites A H. 1987. Accuracy of trajectory calculation in a finite-difference circulation model. J. comp. Phys., 68(2): 272–282.

Carlotti F, Giske J, Werner F. 2000. Modelling zooplankton dynamics. In: Harris R, Wiebe P, Lenz J, Skjoldal H R, Huntley M eds. ICES Zooplankton Methodology Manual. Academic Press, p. 571–667.

Carr S D, Capet X J, Mcwilliams J C et al. 2008. The influence of diel vertical migration on zooplankton transport and recruitment in an upwelling region: estimates from a coupled behavioral-physical model. Fish. Oceanogr., 17(1): 1–15.

Darmofal D L, Haimes R. 1996. An analysis of 3D particle path integration algorithms. J. Comput. Phys., 123: 182–195.

Fasham M J R, Ducklow H W, McKelvie S M. 1990. A nitrogen-based model of plankton dynamics in the oceanic mixed layer. J. Mar. Res., 48(3): 591–639.

Garcia R M, Flores H T. 1999. Computer modeling of oil spill trajectories with a high accuracy method. Spill Sci. Technol. Bull, 5(5/6): 323–330.

Guizien K, Brochier T, Duchne J C et al. 2006. Dispersal of Owenia fusiformis larvae by wind-driven currents: turbulence, swimming behaviour and mortality in a three-dimensional stochastic model. Mar. Ecol Prog. Ser., 311:47–66.

Lett C, Veitch J, van der Lingen C D et al. 2007. Assessment of an environmental barrier to transport of ichthyoplankton from the southern to the northern Benguela ecosystems. Mar. Ecol. Prog. Ser., 347: 247–259.

Marsaleix P, Auclair F, Floor J W et al. 2008. Energy conservation issues in sigma-coordinate free-surface ocean models. Ocean. Mod., 20(1): 61–89.

Miller C B, Lynch D R, Carlotti F et al. 1998. Coupling of an individual-based population dynamic model of Calanus finmarchicus to a circulation model for the Georges Bank Region. Fish. Oceanogr., 7: 219–234.

Oliveira L A, Costa V A F, Baliga B R. 2002. A Lagrangian-Eulerian model of particle dispersion in a turbulent plane mixing layer. Int. J. Numer. Meth. Fl., 40: 639–653.

Parada C, Van der Lingen C D, Mullon C et al. 2003. Modelling the effect of buoyancy on the transport of anchovy (Engraulis capensis) eggs from spawning to nursery grounds in the southern Benguela: an IBM approach. Fish. Oceanogr., 12(3): 170–184.

Peliz A, Marchesiello P, Dubert J et al. 2007. A study of crab larvae dispersal on the Western Iberian Shelf: Physical processes. J. Mar. Syst., 68: 215–236.

Ross O N, Sharpies J. 2004. Recipe for 1-D Lagrangian particle tracking models in space-varying diffusivity. Limnol Oceanogr., 2: 289–302.

Speirs D C, Gurney W S C, Heath M R et al. 2006. Ocean-scale modelling of the distribution, abundance, and seasonal dynamics of the copepod Calanus finmarchicus. Mar. Ecol. Prog. Ser., 313: 173–192.

Tittensor D P, Deyoung B, Tang C L. 2003. Modelling the distribution, sustainability and diapause emergence timing of the copepod Calanus finmarchicus in the Labrador Sea. Fish. Oceanogr., 12(4/5): 299–316.

Visser A W. 1997. Using random walk models to simulate the vertical distribution of particles in a turbulent water column. Mar. Ecol. Prog. Ser., 158: 275–281.

Views

Downloads

CSCD

Alert me when the article has been cited

Submit

Tools

Publicity Resources

Environmental stability via sexual reproduction of cyclical parthenogenetic rotifers affects offspring’s population performances: maternal effects on population dynamics

Responding of zooplankton to environmental factor changes in the Changjiang River estuarine regions in spring-summer from 2016 to 2020

The response of zooplankton abundance in saline meromictic Lake Shira to a change in circulation regime

Effects of shellfish culture on the community and mortality of zooplankton in a subtropical Bay

Functional groups and seasonal diversity of crustacean zooplankton in adjacent waters of Haizhou Bay, South Yellow Sea

Related Author

Huanhuan XU

Yingying GE

Kangning LIU

Cuijuan NIU

Jieqing YANG

Dongrong ZHANG

Yuange CHEN

Longling OUYANG

Related Institution

MOE Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University

College of Fisheries, Henan Normal University

Observation and Research Station on Water Ecosystem in Danjiangkou Reservoir of Henan Province

East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture and Rural Affairs

Key Laboratory of Engineering Oceanography, Second Institute of Oceanography, Ministry of Natural Resources

Address：Editorial Office of JOL, 88 Haijun Rd. Qingdao, 266000, China
Tel：+86-532-82898754 Email：jol@qdio.ac.cn
Technical support is provided by Beijing Founder electronics co., LTD 京ICP备09064830号-19 京公网安备11010802024621
It is recommended to read the content of this site in Chrome&IE9+. Please switch to extreme mode in browser 360.
Cookies We use cookies to help provide and enhance our service and tailor content. By continuing, you agree to the use of cookies.

⁰