Broader pattern of tandem repeats in the mitochondrial control region of Perciformes

Zhaoxia Cui; Yuan Liu; Ka Hou Chu

doi:10.1007/s00343-010-9091-5

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Broader pattern of tandem repeats in the mitochondrial control region of Perciformes

Updated：2023-05-16

- Broader pattern of tandem repeats in the mitochondrial control region of Perciformes
- Journal of Oceanology and Limnology Vol. 28, Issue 4, Pages: 785-794(2010)
- Affiliations：
  
  1. EMBL Institute of Oceanology Chinese Academy of Sciences
  2. Graduate University of the Chinese Academy of Sciences
  3. Department of Biology Chinese University of Hong Kong
- Author bio：
- Funds：
- DOI：10.1007/s00343-010-9091-5
  CLC：
- Online First：29 June 2010，
  
  Published：2010
- Accepted：
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Cui, Z., Liu, Y. & Chu, K.H. Broader pattern of tandem repeats in the mitochondrial control region of Perciformes., Chin. J. Ocean. Limnol. 28, 785–794 (2010). https://doi.org/10.1007/s00343-010-9091-5
DOI：

Cui, Z., Liu, Y. & Chu, K.H. Broader pattern of tandem repeats in the mitochondrial control region of Perciformes., Chin. J. Ocean. Limnol. 28, 785–794 (2010). https://doi.org/10.1007/s00343-010-9091-5 DOI：

摘要

Abstract

Perciformes

the largest order of vertebrates with 20 suborders

is the most diverse fish order that dominates vertebrate ocean life. The complete mitochondrial control region (CR) of Trichiurus japonicus (Trichiuridae

Scombroidei) and Pampus sp. (Stromateidae

Stromateoidei) were amplified and sequenced. Together with data from GenBank

the tandem repeats in the mitochondrial CR from 48 species

which covered nine suborders of Perciformes

are reported in this study. The tandem repeats tend to be long in the suborder Percoidei and Stromateoidei. The identical repeats in 21 species of Cichlidae suggest a common origin and have existed before species divergence. Larimichthys crocea shows tandem repeats instead of the typical structure of the central conserved sequence blocks

which was first reported in Perciformes and vertebrates. This might have resulted from interruption of the polymerase activity during the H-strand synthesis. The four broader patterns presented here for the tandem repeats

including those in both the 5′ and 3′ ends

only in the either 5′ or 3′ end

and in the central conserved domain of the control region

will be useful for understanding the evolution of species.

关键词

Keywords

references

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