

FOLLOWUS
1. Institute of Oceanology Chinese Academy of Sciences
2. Graduate School Chinese Academy of Sciences
Online First:04 December 2009,
Published:2009
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Du, Y., Xu, K. & Lei, Y. Simultaneous enumeration of diatom, protozoa and meiobenthos from marine sediments using Ludox-QPS method., Chin. J. Ocean. Limnol. 27, 775–783 (2009). https://doi.org/10.1007/s00343-009-9224-x
The Ludox-QPS method is a newly developed technique
which combines the Ludox HS 40 density centrifugation and quantitative protargol stain
to enumerate marine ciliates with good taxonomic resolution. We tested the method for simultaneous enumeration of diatoms
protozoa and meiobenthos and compared its extraction efficiency for meiobenthos with that of the routine Ludox-TM centrifugation and a modified protocol using Ludox HS 40. We conducted the evaluation with a sample size of 8.3 ml each from sandy
muddy-sand and muddy sediments collected from the intertidal area of the Yellow Sea in summer 2006 and spring 2007. The Ludox-QPS method not only produced high extraction efficiencies of 97±1.3% for diatoms and 97.6±0.8% for ciliates
indicating a reliable enumeration for eukaryotic microbenthos
but also produced excellent extraction efficiencies of on average 97.3% for total meiobenthos
97.9% for nematodes and 97.8% for copepods from sands
muddy sands and mud. By contrast
the routine Ludox-TM centrifugation obtained only about 74% of total meiobenthos abundance with one extraction cycle
and the modified Ludox HS 40 centrifugation yielded on average 93% of total meiobenthos: 89.4±2.0% from sands
93±4.1% from muddy sands and 97.1±3.0% from mud. Apart from the sediment type
sample volume was another important factor affecting the extraction efficiency for meiobenthos. The extraction rate was increased to about 96.4% when using the same modified Ludox centrifugation for a 4 ml sediment sample. Besides the excellent extraction efficiency
the Ludox-QPS method obtained higher abundances of meiobenthos
in particular nematodes
than the routine Ludox centrifugation
which frequently resulted in an uncertain loss of small meiobenthos during the sieving process. Statistical analyses demonstrated that there were no significant differences between the meiobenthos communities revealed by the Ludox-QPS method and the modified Ludox HS 40 centrifugation
showing the high efficiency of the Ludox-QPS method for simultaneous enumeration of diatom
protozoa and meiobenthos. Moreover
the comparatively high taxonomic resolution of the method
especially for diatoms and ciliates
makes it feasible to investigate microbial ecology at community level.
Alongi D M. 1993. Extraction of protists in aquatic sediments via density gradient centrifugation. In: Kemp, PF, Sherr BF, Sherr EB et al., ed. Handbook of Methods in Aquatic Microbial Ecology. Lewis Publishers, Boca Raton. p. 109–114.
Ansari Z A. 2005. Inter-relationship between marine meiobenthos and microbes. In: Ramaiah, N ed. Marine Microbiology: Facets & Opportunities. National Institute of Oceanography, GOA. p. 175–179.
Barnes N, Bamber R N, Moncrieff C B et al. 2008. Meiofauna in closed coastal saline lagoons in the United Kingdom: structure and biodiversity of the nematode assemblage. Estuarine Coastal and Shelf Science, 79: 328–340.
Burgess R. 2001. An improved protocol for separating meiofauna from sediments using colloidal. Marine Ecology Progress Series, 214: 161–165.
Clarke, K R and Warwick R M. 1994. Change in Marine Communities: an Approach to Statistical Analysis and Interpretation. Plymouth Marine Laboratory, Plymouth. 144 p.
Coull, B C. 1988. Ecology of the marine meiofauna. In: Higgins, R. P. and H. Thiel ed. Introduction to the Study of Meiofauna. Smithsonian Institution Press, Washington, D. C. p. 18–38.
Coull, B C. 1999. Role of meiofauna in estuarine soft-bottom habitats. Australian Journal of Ecology, 24: 327–343.
Epstein, S S. 1995. Simultaneous enumeration of protozoa and micrometazoa from marine sandy sediments. Aquatic Microbial Ecology, 9: 219–227.
Epstein, S S. 1997. Microbial food webs in marine sediments. I. Trophic interactions and grazing rates in two tidal flat communities. Microbial Ecology, 34: 188–198.
Fenchel, T M. 1978. The ecology of micro and meiobenthos. Annual Review of Ecology and Systematics, 9: 99–121.
Giere, O. 1993. Meiobenthology. Springer-Verlag, Berlin, Heidelberg, New York. p.55.
Hamels, I, Sabbe K, Muylaert K et al. 2004. Quantitative importance, composition, and seasonal dynamics of protozoan communities in polyhaline versus freshwater intertidal sediments. Microbial Ecology, 47: 18–29.
Hamels, I. Muylaert K, Sabbe K et al. 2005. Contrasting dynamics of ciliate communities in sandy and silty sediments of an estuarine intertidal flat. European Journal of Protistology, 41: 241–250.
Higgins, R P and Thiel H. 1988. Introduction to the Study of Meiofauna. Smithsonian Institution Press, Washington, D.C. 488 p.
Imai, I and S. Itakura, 1999. Importance of cysts in the population dynamics of the red tide flagellate Heterosigma akashiwo. Marine Biology, 133: 755–762.
Jonge, V. N. de, 1979. Quantitative separation of benthic diatoms from sediments using density gradient centrifugation in the colloidal silica Ludox -TM. Marine Biology, 51: 267–278.
Kennedy, A. D, Jacoby C A, 1999. Biological indicators of marine environmental health: meiofauna-a neglected benthic component? Environmental Monitoring and Assessment, 54: 47–68.
Kuipers, B R, de Wilde P A W J, Creutzberg F. 1981. Energy flow in a tidal flat ecosystem. Marine Ecology Progress Series, 5: 215–221.
Lei, Y L, Xu K D. 2007. Methods for ecological studies of marine benthic protozoa. Marine science, 31: 49–57. (in Chinese)
Mare, M F. 1942. A study of a marine benthic community with special reference to the micro-organism. Journal of the Marine Biological Association of the United Kingdom, 25: 517–554.
Mitbavkar, S, Anil A C. 2002. Diatoms of the microphytobenthic community: population structure in a tropical intertidal sand flat. Marine Biology, 140: 41–57.
Mitbavkar, S, Anil A C. 2004. Vertical migratory rhythms of benthic diatoms in a tropical intertidal sand flat: influence of irradiance and tides. Marine Biology, 145: 9–20.
McIntyre, A D, Warwick R M. 1984. Meiofauna technique. In: Holme, N. A. and A. D. McIntyre, ed. Methods for the Study of Marine Benthos. Blackwell, Oxford. p. 217–224.
Montagnes, D J S, Lynn D H. 1993. A quantitative protargol stain (QPS) for ciliates and other protists. In: Kemp, P. F., B. F. Sherr, E. B. Sherr et al., ed. Handbook of Methods in Aquatic Microbial Ecology, Lewis Publishers, Boca Raton. p. 229–240.
Moreno, M. Ferrero T J, Gallizia I et al. 2008. An assessment of the spatial heterogeneity of environmental disturbance within an enclosed harbour through the analysis of meiofauna and nematode assemblages. Estuarine Coastal and Shelf Science, 77: 565–576.
Oppenheim, D R and Ellis-Evans J C. 1989. Depth-related changes in benthic diatom assemblages of a maritime Antarctic lake. Polar Biology, 9: 525–532.
Pfannkuche, O, Thiel H. 1988. Sample processing. In: Higgins, R P, H Thiel, ed. Introduction to the Study of Meiofauna. Smithsonian Institution Press, Washington, D. C. p. 134–145.
Skibbe, O, 1994. An improved quantitative protargol stain for ciliates and others planktonic protests. Arch Hydrobiology, 130: 339–347.
Starink, M, Bär-Gilissen M-J, Bar et. al. R P M 1994. Quantitative centrifugation to extract benthic protozoa from fresh water sediments. Applied and Environmental Microbiology, 60: 167–173.
Tso, S F, Taghon G L. 1997. Enumeration of protozoa and bacteria in muddy sediment. Microbial Ecology, 33: 144–148.
Wickham, Gieseke S, A, Berninger U-G. 2000. Benthic ciliate identification and enumeration: an improved methodology and its application. Aquatic Microbial Ecology, 22: 79–91.
Zhou, H, Zhang Z N. 2003. Rationale of the multivariate statistical software PRIMER and its application in benthic community ecology. Journal of Ocean University of Qingdao, 33(1): 58–64. (in Chinese)
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