Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean

Ping GAO; Lingyun QU; Guangxun DU; Qinsheng WEI; Xuelei ZHANG; Guang YANG

doi:10.1007/s00343-020-9343-y

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Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean

Ecology | Updated：2023-06-06

- Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean
- Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean
- 海洋湖沼学报（英文） 2021年39卷第2期页码：582-597
- Affiliations：
  
  1.Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources (MNR), Qingdao 266061, China
  2.Laboratory for Marine Fisheries Science and Food Production Processes, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
  3.Laboratory for Marine Ecology and Environmental Science, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
- Author bio：
  
  Lingyun QU, E-mail: qly@fio.org.cn
- Funds：
  
  China Ocean Mineral Resources Research and Development Association Program(DY135-E2-1-01);China Ocean Mineral Resources Research and Development Association Program(DY135-E2-4-00);the China Global Sea-Atmosphere Interaction Research Program(GASI-02-IND-STSsum);the Aoshan Program Supported by Qingdao National Laboratory for Marine Science and Technology(2016ASKJ14);© Chinese Society for Oceanology and Limnology, Science Press and Springer-Verlag GmbH Germany, part of Springer Nature 2021
- DOI：10.1007/s00343-020-9343-y
  中图分类号：
- 收稿：2020-01-06，
  
  录用：2020-2-19，
  
  网络首发：2020-04-24，
  
  纸质出版：2021-03
- Accepted：
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Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean[J]. 海洋湖沼学报（英文）, 2021,39(2):582-597.

Ping GAO, Lingyun QU, Guangxun DU, et al. Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean[J]. Journal of Oceanology and Limnology, 2021, 39(2): 582-597.
Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean[J]. 海洋湖沼学报（英文）, 2021,39(2):582-597. DOI： 10.1007/s00343-020-9343-y.

Ping GAO, Lingyun QU, Guangxun DU, et al. Bacterial and archaeal communities in deep sea waters near the Ninetyeast Ridge in Indian Ocean[J]. Journal of Oceanology and Limnology, 2021, 39(2): 582-597. DOI： 10.1007/s00343-020-9343-y.

摘要

Abstract

Depth-dependent distribution patterns of bacterial and archaeal communities in deep sea water column around the Ninetyeast Ridge in the Indian Ocean were investigated using 16S rRNA gene profiling. Sampling was conducted at the northern Ninetyeast Ridge (1°59.89'N-9°59.70'S

87°58.90'E-88°00.03'E) from September to November 2016 where samples were collected from the bathyal (1 000 m) to bathypelagic depths (

4 000 m) in four different stations. A total of 1 565 405 clean data falling into 6 712 bacterial OTUs and 1 452 727 clean data falling into 806 archaeal OTUs based on 97% similarity level were analyzed. Most of the bacterial 16S rRNA gene sequences were affiliated with Gammaproteobacteria

followed by Alphaproteobacteria and Bacteroidia. The archaeal 16S rRNA gene sequences mostly affiliated to Nitrososphaeria (Thaumarchaeota) dominated with relative abundances ranging from 52.68% to 97.2%

followed by Thermoplasmata (Euryarchaeota). Vertical partitioning of bacterial and archaeal communities among different water layers was observed. Canonical correspondence analysis (CCA) and Spearman's correlations revealed that depth (

=0.003)

dissolved oxygen (

=0.019)

and nitrite (

=0.033) were the main environmental factors affecting bacterial community structure at genus level in the Ninetyeast Ridge. On the other hand

the first two CCA axes accounted for 74.4% of the explained total variance

it seems that the archaeal communities at genus level were heavily influenced by the environmental variables including depth

dissolved oxygen (DO)

nitrite

salinity

phosphate

ammonia

nitrate

and silicate

but none of them exhibited any significant correlation on the structuring (

0.1).

关键词

Keywords

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