Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season

Hang LAI; Li ZHAO; Wen YANG; Regan NICHOLAUS; Betina LUKWAMBE; Jinyong ZHU; Zhongming ZHENG

doi:10.1007/s00343-020-9331-2

Your Location：

Home >

Browse articles >

Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season

Ecology | Updated：2023-06-06

- Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season
- Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season
- 海洋湖沼学报（英文） 2021年39卷第2期页码：566-581
- Affiliations：
  
  1.School of Marine Sciences, Ningbo University, Ningbo 315211, China
  2.Department of Natural Sciences, Mbeya University of Science and Technology, Mbeya 53000, Tanzania
  3.Department of Food Science and Technology, University of Dar es Salaam, Dar es Salaam 11000, Tanzania
- Author bio：
  
  Zhongming ZHENG, E-mail: zhengzhongming@nbu.edu.cn
- Funds：
  
  Fisheries Species Conservation Program of the Agricultural Department of China(171821303154051044);Fisheries Species Conservation Program of the Agricultural Department of China(17190236);the Natural Science Foundation of Zhejiang Province(LQ20C190003);the Ningbo Municipal Natural Science Foundation(2019A610421);the Natural Science Foundation of Ningbo Municipality(2019A610443);the K. C. Wong Magna Fund of Ningbo University;© Chinese Society for Oceanology and Limnology, Science Press and Springer-Verlag GmbH Germany, part of Springer Nature 2021
- DOI：10.1007/s00343-020-9331-2
  中图分类号：
- 收稿：2020-01-03，
  
  录用：2020-2-13，
  
  网络首发：2020-03-14，
  
  纸质出版：2021-03
- Accepted：
Scan QR Code
Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season[J]. 海洋湖沼学报（英文）, 2021,39(2):566-581.

Hang LAI, Li ZHAO, Wen YANG, et al. Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season[J]. Journal of Oceanology and Limnology, 2021, 39(2): 566-581.
Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season[J]. 海洋湖沼学报（英文）, 2021,39(2):566-581. DOI： 10.1007/s00343-020-9331-2.

Hang LAI, Li ZHAO, Wen YANG, et al. Eukaryotic microbial distribution pattern and its potential effects on fisheries in the fish reserves of Qiantang River in breeding season[J]. Journal of Oceanology and Limnology, 2021, 39(2): 566-581. DOI： 10.1007/s00343-020-9331-2.

摘要

Abstract

To examine the eukaryotic biodiversity of aquatic ecosystems in the Qiantang River

China

eukaryotic microbes in the river were investigated using 18S rRNA gene sequencing during the breeding season (July to August 2018). Four distinct distribution patterns (1. Jiande; 2. Tonglu and Fuyang; 3. Jiubao; 4. Yanguan) of the microbial community and their potential effects on fishery activities were observed. Results show lower abundances of Dinophyta and Fungi and higher abundances of Cryptophyta and Chlorophyta in Tonglu and Fuyang than those in the other three sections. In addition

the reserves (Tonglu and Fuyang) destabilized the original eukaryotic microbial co-occurrence network. Among all the environmental factors measured

nitrogen (nitrite

nitrate

ammonium)

water temperature and total chlorophyll a acted as major driving factors that controlled the eukaryotic microbial distribution. Furthermore

the existence of some algae (e.g.

Chrysophyceae

Cryptophytes

and Chlorophyceae) and fungi (e.g.

Rhizophydium) in Tonglu and Fuyang was beneficial to juvenile fish growth and water quality

although some detrimental species (e.g.

Aphanomyces) needed attention. This study provides further insights into the sustainable protection and utilization of rivers.

关键词

Keywords

references

AbellJM,ÖzkundakciD,HamiltonDP.2010.NitrogenandphosphoruslimitationofphytoplanktongrowthinNewZealandlakes:implicationsforeutrophicationcontrol. Ecosystems , 13 (7):966-977,https://doi.org/10.1007/s10021-010-9367-9..

AndrewsSW,GrossES,HuttonPH.2017.ModelingsaltintrusionintheSanFranciscoEstuarypriortoanthropogenicinfluence. Cont. Shelf Res. , 146 :58-81,https://doi.org/10.1016/j.csr.2017.07.010..

AnthonyEJ,BrunierG,BessetM,GoichotM,DussouillezP,NguyenVL.2015.LinkingrapiderosionoftheMekongRiverdeltatohumanactivities. Sci. Rep. , 5 :14745,https://doi.org/10.1038/srep14745..

ArrigoKR.2004.Marinemicroorganismsandglobalnutrientcycles. Nature , 437 (7057):349-355,https://doi.org/10.1038/nature04159..

BairdME,WalkerSJ,WallaceBB,WebsterIT,ParslowJS.2003.Theuseofmechanisticdescriptionsofalgalgrowthandzooplanktongrazinginanestuarineeutrophicationmodel. Estuar., Coast. Shelf Sci. , 56 (3-4):685-695,https://doi.org/10.1016/S0272-7714(02)00219-6..

BlanchetFG,LegendreP,BorcardD.2008.Modellingdirectionalspatialprocessesinecologicaldata. Ecol. Modell. , 215 (4):325-336,https://doi.org/10.1016/j.ecolmodel.2008.04.001..

BokulichNA,SubramanianS,FaithJJ,GeversD,GordonJI,KnightR,MillsDA,CaporasoJG.2013.QualityfilteringvastlyimprovesdiversityestimatesfromIlluminaampliconsequencing. Nat. Methods , 10 (1):57-59,https://doi.org/10.1038/nmeth.2276..

BrownBL,SwanCM.2010.Dendriticnetworkstructureconstrainsmetacommunitypropertiesinriverineecosystems. J. Anim. Ecol. , 79 (3):571-580,https://doi.org/10.1111/j.1365-2656.2010.01668.x..

ChenJ,GaoC,ZengXF,XiongM,WangYJ,JingC,KrysanovaV,HuangJL,ZhaoN,SuBD.2017.Assessingchangesofriverdischargeunderglobalwarmingof1.5℃and2℃intheupperreachesoftheYangtzeRiverBasin:approachbyusingmultiple-GCMsandhydrologicalmodels. Quat. Int. , 453 :63-73,https://doi.org/10.1016/j.quaint.2017.01.017..

ChenWD,RenKX,IsabweA,ChenHH,LiuM,YangJ.2019.Stochasticprocessesshapemicroeukaryoticcommunityassemblyinasubtropicalriveracrosswetanddryseasons. Microbiome , 7 :138,https://doi.org/10.1186/s40168-019-0749-8..

ChustG,IrigoienX,ChaveJ,HarrisRP.2013.Latitudinalphytoplanktondistributionandtheneutraltheoryofbiodiversity. Global Ecol. Biogeogr. , 22 (5):531-543,https://doi.org/10.1111/geb.12016..

ClarkeKR,WarwickRM.2001.Afurtherbiodiversityindexapplicabletospecieslists:variationintaxonomicdistinctness. Mar. Ecol. Prog. Ser. , 216 :265-278,https://doi.org/10.3354/meps216265..

CoyteKZ,SchluterJ,FosterKR.2015.Theecologyofthemicrobiome:networks,competition,andstability. Science , 350 (6261):663-666,https://doi.org/10.1126/science.aad2602..

DeNooijerLJ,ToyofukuT,KitazatoH.2009.ForaminiferapromotecalcificationbyelevatingtheirintracellularpH.Proc.Natl.Acad.Sci.USA, 106 (36):15374-15378,https://doi.org/10.1073/pnas.0904306106.

DeBoerJA,WebberCM,DixonTA,PopeKL.2016.TheinfluenceofaseverereservoirdrawdownonspringtimezooplanktonandlarvalfishassemblagesinRedWillowReservoir,Nebraska. J. Freshwater Ecol. , 31 (1):131-146,https://doi.org/10.1080/02705060.2015.1055312..

DengY,JiangYH,YangYF,HeZL,LuoF,ZhouJZ.2012.Molecularecologicalnetworkanalyses. BMC Bioinf. , 13 :113,https://doi.org/10.1186/1471-2105-13-113..

DengY,ZhangP,QinYJ,TuQC,YangYF,HeZL,SchadtCW,ZhouJZ.2016.Networksuccessionrevealstheimportanceofcompetitioninresponsetoemulsifiedvegetableoilamendmentforuraniumbioremediation. Environ. Microbiol. , 18 (1):205-218,https://doi.org/10.1111/1462-2920.12981..

DuarteLN,CoelhoFJRC,ClearyDFR,BonifácioD,MartinsP,GomesNCM.2019.Bacterialandmicroeukaryoticplanktoncommunitiesinasemiintensiveaquaculturesystemofseabass( Dicentrarchus labrax ):aseasonalsurvey. Aquaculture , 503 :59-69,https://doi.org/10.1016/j.aquaculture.2018.12.066..

EdgarRC.2010.SearchandclusteringordersofmagnitudefasterthanBLAST. Bioinformatics , 26 (19):2460-2461,https://doi.org/10.1093/bioinformatics/btq461..

FaustK,RaesJ.2012.Microbialinteractions:fromnetworkstomodels. Nat. Rev. Microbiol. , 10 (8):538-550,https://doi.org/10.1038/nrmicro2832..

FoysalJ,LisaAK.2018.IsolationandcharacterizationofBacillussp.strainBC01fromsoildisplayingpotentantagonisticactivityagainstplantandfishpathogenicfungiandbacteria. J. Genet. Eng. Biotechnol. , 16 (2):387-392,https://doi.org/10.1016/j.jgeb.2018.01.005..

FrenkenT,AlacidE,BergerSA,BourneEC,GerphagnonM,GrossartHP,GsellAS,IbelingsBW,KagamiM,KüpperFC,LetcherPM,LoyauA,MikiT,NejstgaardJC,RasconiS,ReñéA,RohrlackT,Rojas-JimenezK,SchmellerDS,ScholzB,SetoK,Sime-NgandoT,SukenikA,VandeWaalDB,VandenWyngaertS,VanDonkE,WolinskaJ,WurzbacherC,AghaR.2017.Integratingchytridfungalparasitesintoplanktonecology:researchgapsandneeds. Environ. Microbiol. , 19 (10):3802-3822,https://doi.org/10.1111/1462-2920.13827..

GongJ,DongJ,LiuXH,MassanaR.2013.ExtremelyhighcopynumbersandpolymorphismsoftherDNAoperonestimatedfromsinglecellanalysisofoligotrichandperitrichciliates. Protist , 164 (3):369-379,https://doi.org/10.1016/j.protis.2012.11.006..

GuimeràR,Sales-PardoM,AmaralLAN.2007.Classesofcomplexnetworksdefinedbyrole-to-roleconnectivityprofiles. Nat. Phys. , 3 (1):63-69,https://doi.org/10.1038/nphys489..

HongB,SunZZ,ZhangYP,ZengZC,TianZQ.2009.EvaluationoneffectoffisheryresourceenhancementandreleaseinHuangpujiangupstream. Fish. Sci. Technol. Inf. , 36 (4):178-181.(inChinese).

HuAY,LiS,ZhangLP,WangHJ,YangJ,LuoZX,RashidA,ChenSQ,HuangWX,YuCP.2018.Prokaryoticfootprintsinurbanwaterecosystems:acasestudyofurbanlandscapepondsinacoastalcity,China. Environ. Pollut. , 242 :1729-1739,https://doi.org/10.1016/j.envpol.2018.07.097..

HuangYL,HuangJL.2019.CoupledeffectsoflandusepatternandhydrologicalregimeoncompositionanddiversityofriverineeukaryoticcommunityinacoastalwatershedofSoutheastChina. Sci. Total Environ. , 660 :787-798,https://doi.org/10.1016/j.scitotenv.2019.01.063..

HuismanJ,MatthijsHCP,VisserPM.2005.HarmfulCyanobacteria.Springer,Dordrecht. https://doi.org/10.1007/1-4020-3022-3 https://doi.org/10.1007/1-4020-3022-3 .

IbelingsBW,DeBruinA,KagamiM,RijkeboerM,BrehmM,VanDonkE.2004.Hostparasiteinteractionsbetweenfreshwaterphytoplanktonandchytridfungi(Chytridiomycota). J. Phycol. , 40 (3):437-453,https://doi.org/10.1111/j.1529-8817.2004.03117.x..

IsabweA,RenKX,WangYM,PengF,ChenHH,YangJ.2019.Communityassemblymechanismsunderlyingthecoreandrandombacterioplanktonandmicroeukaryotesinariver-reservoirsystem. Water , 11 (6):1127,https://doi.org/10.3390/w11061127..

IsabweA,YangJR,WangYM,LiuLM,ChenHH,YangJ.2018.Communityassemblyprocessesunderlyingphytoplanktonandbacterioplanktonacrossahydrologicchangeinahuman-impactedriver. Sci. Total Environ. , 630 :658-667,https://doi.org/10.1016/j.scitotenv.2018.02.210..

JamesTY,LetcherPM,LongcoreJE,Mozley-StandridgeSE,PorterD,PowellMJ,GriffithGW,VilgalysR.2006.Amolecularphylogenyoftheflagellatedfungi(Chytridiomycota)anddescriptionofanewphylum(Blastocladiomycota). Mycologia , 98 (6):860-871,https://doi.org/10.3852/mycologia.98.6.860..

KinnulaH,MappesJ,ValkonenJK,PulkkinenK,SundbergLR.2017.Higherresourcelevelpromotesvirulenceinanenvironmentallytransmittedbacterialfishpathogen. Evol. Appl. , 10 (5):462-470,https://doi.org/10.1111/eva.12466..

LefèvreE,RousselB,AmblardC,Sime-NgandoT.2008.Themoleculardiversityoffreshwaterpicoeukaryotesrevealshighoccurrenceofputativeparasitoidsintheplankton. PLoS One , 3 (6):e2324,https://doi.org/10.1371/journal.pone.0002324..

LiuJ,SoininenJ,HanBP,DeclerckSAJ.2013a.Effectsofconnectivity,dispersaldirectionalityandfunctionaltraitsonthemetacommunitystructureofriverbenthicdiatoms. J. Biogeogr. , 40 (12):2238-2248,https://doi.org/10.1111/jbi.12160..

LiuLM,ChenHH,LiuM,YangJR,XiaoP,WilkinsonDM,YangJ.2019.Responseoftheeukaryoticplanktoncommunitytothecyanobacterialbiomasscycleover6yearsintwosubtropicalreservoirs. ISME J. , 13 (9):2196-2208,https://doi.org/10.1038/s41396-019-0417-9..

LiuLM,YangJ,LvH,YuXQ,WilkinsonDM,YangJ.2015.Phytoplanktoncommunitiesexhibitastrongerresponsetoenvironmentalchangesthanbacterioplanktoninthreesubtropicalreservoirs. Environ. Sci. Technol. , 49 (18):10850-10858,https://doi.org/10.1021/acs.est.5b02637..

LiuLM,YangJ,YuXQ,ChenGJ,YuZ.2013b.Patternsinthecompositionofmicrobialcommunitiesfromasubtropicalriver:effectsofenvironmental,spatialandtemporalfactors. PLoS One , 8 (11):e81232,https://doi.org/10.1371/journal.pone.0081232..

LvH,YangJ,LiuLM.2013.Temporalpatternprevailsoverspatialvariabilityinphytoplanktoncommunitiesfromasubtropicalwatersupplyreservoir. Oceanol. Hydrobiol. Stud. , 42 (4):420-430,https://doi.org/10.2478/s13545-013-0098-3..

MayRM.2001.StabilityandComplexityinModelEcosystems.PrincetonUniversityPress,Princeton.

MeyersSD,LinvilleAJ,LutherME.2014.Alterationofresidualcirculationduetolarge-scaleinfrastructureinacoastalplainestuary. Estuar. Coast. , 37 (2):493-507,https://doi.org/10.1007/s12237-013-9691-3..

NeutelAM,HeesterbeekJAP,VanDeKoppelJ,HoenderboomG,VosA,KaldewayC,BerendseF,DeRuiterPC.2007.Reconcilingcomplexitywithstabilityinnaturallyassemblingfoodwebs. Nature , 449 (7162):599-602,https://doi.org/10.1038/nature06154..

Ortiz-CañavateBK,WolinskaJ,AghaR.2019.Fungicidesatenvironmentallyrelevantconcentrationscanpromotetheproliferationoftoxicbloom-formingcyanobacteriabyinhibitingnaturalfungalparasiteepidemics. Chemosphere , 229 :18-21,https://doi.org/10.1016/j.chemosphere.2019.04.203..

PengB,WangYN,ZhangHJ,ChenC,LuoHL,WangM.2019.Ecologicalassessmentofphytoplanktoncommunityviamicroscopicmethodand18SrRNAgenesequencinginPearlRiverEstuary. E3S Web Conf. , 131 :01043,https://doi.org/10.1051/e3sconf/201913101043..

PriscuJC.1995.PhytoplanktonnutrientdeficiencyinlakesoftheMcMurdoDryValleys,Antarctica. Freshwater Biol. , 34 (2):215-227,https://doi.org/10.1111/j.1365-2427.1995.tb00882.x..

SaylorRK,MillerDL,VanderseaMW,BevelhimerMS,SchofieldPJ,BennettWA.2010.Epizooticulcerativesyndromecausedby Aphanomyces invadans incaptivebullseyesnakehead Channa marulius collectedfromSouthFlorida,USA. Dis. Aquat. Org. , 88 (2):169-175,https://doi.org/10.3354/dao02158..

ShadeA,PeterH,AllisonSD,BahoDL,BergaM,BürgmannH,HuberDH,LangenhederS,LennonJT,MartinyJBH,MatulichKL,SchmidtTM,Handelsman1J.2012.Fundamentalsofmicrobialcommunityresistanceandresilience. Front. Microbiol. , 3 :417,https://doi.org/10.3389/fmicb.2012.00417..

ShetyeSS,KurianS,NaikH,GaunsM,ChndrasekhararaoAV,KumarA,NaikB.2019.VariabilityoforganicnitrogenanditsroleinregulatingphytoplanktonintheeasternArabianSea. Mar. Pollut. Bull. , 141 :550-560,https://doi.org/10.1016/j.marpolbul.2019.02.036..

SteeleJA,CountwayPD,XiaL,VigilPD,BemanJM,KimDY,ChowCET,SachdevaR,JonesAC,SchwalbachMS,RoseJM,HewsonI,PatelA,SunFZ,CaronDA,FuhrmanJA.2011.Marinebacterial,archaealandprotistanassociationnetworksrevealecologicallinkages. ISME J. , 5 (9):1414-1425,https://doi.org/10.1038/ismej.2011.24..

SuZF,WuJM,LiuWY,HeJJ,XuJH.2014.StudyonassessmentofenhancementeffectoffisherystockinChangzhouCity. Mod. Agric. Sci. Technol. ,(12):261-262, 264 .(inChinesewithEnglishabstract).

SunW,XiaCY,XuMY,GuoJ,SunGP,WangAJ.2014.Communitystructureanddistributionofplanktonicammonia-oxidizingArchaeaandbacteriaintheDongjiangRiver,China. Res. Microbiol. , 165 (8):657-670,https://doi.org/10.1016/j.resmic.2014.08.003..

TasevskaO,JersabekCD,KostoskiG,GušeskaD.2012.Differencesinrotifercommunitiesintwofreshwaterbodiesofdifferenttrophicdegree(LakeOhridandLakeDojran,Macedonia). Biologia , 67 (3):565-572,https://doi.org/10.2478/s11756-012-0041-x..

TongYY.2001.AnalysisonthestatusandconstraintsoffisheryresourcesdevelopmentandutilizationinthelowerreachesoftheQiantangRiver. Chin. Fish. ,(4):18-19.(inChinese)

VrebosD,BeauchardO,MeireP.2017.Theimpactoflanduseandspatialmediatedprocessesonthewaterqualityinariversystem. Sci. Total Environ. , 601 -602:365-373,https://doi.org/10.1016/j.scitotenv.2017.05.217..

WanY,XuLL,HuJ,XuC,WanA,AnSQ,ChenYS.2015.Theroleofenvironmentalandspatialprocessesinstructuringstreammacroinvertebratescommunitiesinalargeriverbasin. Clean-Soil, Air, Water , 43 (12):1633-1639,https://doi.org/10.1002/clen.201300861..

WangZH.1995.ProtectionandexploitionoffisheryresourcesintheQiantangRiver. Chin. J. Fish. , 8 (2):9-17,8.(inChinese).

WenXL,XiYL,QianFP,ZhangG,XiangXL.2011.ComparativeanalysisofrotifercommunitystructureinfivesubtropicalshallowlakesinEastChina:roleofphysicalandchemicalconditions. Hydrobiologia , 661 (1):303-316,https://doi.org/10.1007/s10750-010-0539-6..

XueYY,ChenHH,YangJR,LiuM,HuangBQ,YangJ.2018.Distinctpatternsandprocessesofabundantandrareeukaryoticplanktoncommunitiesfollowingareservoircyanobacterialbloom. ISME J. , 12 (9):2263-2277,https://doi.org/10.1038/s41396-018-0159-0..

ZhangAJ,LiuJD,YangYJ,GuoAH,GuZM.2016.AnalysisofcommunitycharacteristicsofmacrozoobenthosinenhancementandreleasingzoneinTonglusectionofQiantangRiver. Acta Agric. Zhejiang , 28 (8):1323-1331.(inChinesewithEnglishabstract).

ZhangHJ,HuangXL,HuangL,BaoFJ,XiongSL,WangK,ZhangDM.2018a.Microeukaryoticbiogeographyinthetypicalsubtropicalcoastalwaterswithmultipleenvironmentalgradients. Sci. Total Environ. , 635 :618-628,https://doi.org/10.1016/j.scitotenv.2018.04.142..

ZhangK,JiangFY,ChenH,DibarDT,WuQL,ZhouZZ.2019.TemporalandspatialvariationsinzooplanktoncommunitiesinrelationtoenvironmentalfactorsinfourfloodplainlakeslocatedinthemiddlereachoftheYangtzeRiver,China. Environ. Pollut. , 251 :277-284,https://doi.org/10.1016/j.envpol.2019.04.139..

ZhangXM,WangXJ,TuZ,ZhangPD,WangYZ,GaoTX,WangSJ.2009.CurrentstatusandprospectoffisheriesresourceenhancementinShandongProvince. Chin. Fish. Econ. , 27 (2):51-58.(inChinesewithEnglishabstract).

ZhangYZ,ZhengSJ,ZhangWP.2018b.TheassessmentofreleasingandenhancementoffisheryresourcesintheQiantangRiver. J. Zhejiang Norm. Univ. ( Nat. Sci. ), 41 (1):97-101.(inChinesewithEnglishabstract).

ZhaoK,SongK,PanYD,WangLZ,DaLJ,WangQX.2017.Metacommunitystructureofzooplanktoninrivernetworks:rolesofenvironmentalandspatialfactors. Ecol. Indic. , 73 :96-104,https://doi.org/10.1016/j.ecolind.2016.07.026..

Zorzal-AlmeidaS,SalimA,AndradeMRM,deNovaesNascimentoM,BiniLM,BicudoDC.2018.Effectsoflanduseandspatialprocessesinwaterandsurfacesedimentoftropicalreservoirsatlocalandregionalscales. Sci. Total Environ. , 644 :237-246,https://doi.org/10.1016/j.scitotenv.2018.06.361..

浏览量

Downloads

CSCD

文章被引用时，请邮件提醒。

Submit

工具集

关联资源

Microplastic transport from a wastewater treatment plant into Qiantang River, an estuarine river

Epiphytic zooplankton community profiles in a typical urban wetland as revealed by DNA metabarcoding

水下超声速气流流场非定常特性研究

基于模态频率的V型缺口梁裂纹扩展速率模型

含缺陷轮盘失效概率分析流程与数值模拟