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School of Life Science, Shanxi Key Laboratory for Research and Development of Regional Plants, Shanxi University, Taiyuan 030006, China
Shulian XIE, E-mail: xiesl@sxu.edu.cn
收稿:2020-03-06,
录用:2020-4-19,
网络首发:2020-06-28,
纸质出版:2021-05
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Affinities of freshwater "Chantransia" stage algae (Rhodophyta) from China based on molecular and morphological analyses[J]. 海洋湖沼学报(英文), 2021,39(3):1063-1076.
Jinfen HAN, Fangru NAN, Jia FENG, et al. Affinities of freshwater "Chantransia" stage algae (Rhodophyta) from China based on molecular and morphological analyses[J]. Journal of Oceanology and Limnology, 2021, 39(3): 1063-1076.
Affinities of freshwater "Chantransia" stage algae (Rhodophyta) from China based on molecular and morphological analyses[J]. 海洋湖沼学报(英文), 2021,39(3):1063-1076. DOI: 10.1007/s00343-020-0114-6.
Jinfen HAN, Fangru NAN, Jia FENG, et al. Affinities of freshwater "Chantransia" stage algae (Rhodophyta) from China based on molecular and morphological analyses[J]. Journal of Oceanology and Limnology, 2021, 39(3): 1063-1076. DOI: 10.1007/s00343-020-0114-6.
Twelve putative "Chantransia" isolates were collected from six locations across Hubei
Shanxi
Guizhou
and Henan Provinces in China. Their morphological characters were evaluated via the Ward's method of hierarchical cluster analysis in SPSS software to classify phylogenetic relationships among the isolates. The morphological data revealed that isolate HN31 (called group "MALL") was distinct from the other specimens being macroscopic with large vegetative cells and monosporangia (
>
20 μm in diameter). The 11 other isolates were grouped into three clusters
corresponding to the species
Audouinella tenella
A
.
hermannii
and
A
.
pygmaea
. The morphological "Chantransia" stage of the species
reportedly belonging to the orders Batrachospermales
Thoreales
and the phylogenetically distant genus
Audouinella
are very similar
resulting in the difficulty to distinguish them based just on morphology. Therefore
molecular analysis of
rbc
L
UPA
and COI-5P was conducted to infer the phylogenetic position of all isolates in this study. All "
A
.
tenella
" and "
A
.
hermannii
" sequences belong to order Batrachospermales
while the isolate HN31 was the "Chantransia" of
Thorea hispida
. The six other specimens varied morphologically
but they were within the circumscription of "
A
.
pygmaea
". All three molecular markers show that all "
pygmaea
" isolates also represent the "Chantransia" of
T
.
hispida
. Furthermore
results from this investigation proposed a new species—
Sheathia qinyuanensis
corresponding to the isolates QY1 and QY2.
Chen L, Feng J, Han X J, Xie S L. 2014. Investigation of a freshwater acrochaetioid alga (Rhodophyta) with molecular and morphological methods. Nordic Journal of Botany , 32 (5): 529-535, https://doi.org/10.1111/njb.00407..
Chiasson W B, Johanson K G, Sherwood A R, Vis M L. 2007. Phylogenetic affinities of form taxon Chantransia pygmaea (Rhodophyta) specimens from the Hawaiian Islands. Phycologia , 46 (3): 257-262, https://doi.org/10.2216/06-79.1..
Chiasson W B, Sabo N J, Vis M L. 2005. Affinities of freshwater putative chantransia stages (Rhodophyta) from molecular and morphological data. Phycologia , 44 (2): 163-168, https://doi.org/10.2216/0031-8884(2005)44[163:aofpcs]2.0.co;2..
Clarkston B E, Saunders G W. 2010. A comparison of two DNA barcode markers for species discrimination in the red algal family Kallymeniaceae (Gigartinales, Florideophyceae), with a description of Euthora timburtoni i sp. nov. Botany , 88 (2): 119-131, https://doi.org/10.1139/b09-101..
Entwisle T J, Vis M L, Chiasson W B, Necchi O Jr, Sherwood A R. 2009. Systematics of the Batrachospermales (Rhodophyta)-a synthesis. Journal of Phycology , 45 (3): 704-715, https://doi.org/10.1111/j.1529-8817.2009.00686.x..
Felsenstein J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. Journal of Molecular Evolution , 17 (6): 368-376, https://doi.org/10.1007/bf01734359..
George D, Mallery P. 2010. SPSS for Windows Step By Step: A Simple Guide and Reference, 17.0 Update. 10 th edn. Allyn & Bacon, Boston. 386p.
Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology , 52 (5): 696-704, https://doi.org/10.1080/10635150390235520..
Guiry M D, Guiry G M. 2020. World-wide electronic publication, National University of Ireland, Galway. AlgaeBase , http://www.algaebase.org http://www.algaebase.org . Accessed on 2020-01-13. .
Han X J. 2012. Phylogenetic Relationship of Audouinella Based on Gene Sequences. Master's dissertation, Shanxi University. 65p. (in Chinese with English abstract)
Harper J, Saunders G. 1998. A molecular systematic investigation of the Acrochaetiales (Florideophycidae, Rhodophyta) and related taxa based on nuclear small-subunit ribosomal DNA sequence data. European Journal of Phycology , 33 (3): 221-229, https://doi.org/10.1080/09670269810001736723..
Hind K R, Saunders G W. 2013. A molecular phylogenetic study of the Tribe Corallineae (Corallinales, Rhodophyta) with an assessment of genus-level taxonomic features and descriptions of novel genera. Journal of Phycology , 49 (1): 103-114, https://doi.org/10.1111/jpy.12019..
Jao C C. 1941. Studies on the freshwater algae of China. Ⅷ. A preliminary account of the Chinese freshwater rhodophyceae. Sinensia , 12 : 245-290..
Ji L, Feng J, Nan F R, Chen L, Hu B F, Xie S L. 2017. Evaluating DNA barcode markers for freshwater red algae: a case study using family Batrachospermaceae. Acta Hydrobiologica Sinica , 41 (3): 643-651, https://doi.org/10.7541/2017.82. (in Chinese with English abstract).
Ji L. 2013. Molecular Phylogenetics of Batrachospermum Roth (Rhodophyta) of China. Doctoral dissertation, Shanxi University. 197p. (in Chinese with English abstract)
Johnston E T, Dixon K R, West J A, Buhari N, Vis M L. 2018. Three gene phylogeny of the Thoreales (Rhodophyta) reveals high species diversity. Journal of Phycology , 54 (2): 159-170, https://doi.org/10.1111/jpy.12618..
Kaczmarczyk D, Sheath R G. 1992. Pigment content and carbon to nitrogen ratios of freshwater red algae growing at different light levels. Japanese Journal of Phycology , 40 : 279-282..
Kumano S. 2002. Freshwater Red Algae of the World. Biopress Ltd, Bristol. 375p.
Li Q, Ji L, Xie S L. 2010. Phylogenetic analysis of Batrachospemales (Florideophyceae, Rhodophyta) based on chloroplast rbc L sequences. Acta Hydrobiologica Sinica , 36 (1): 20-28, https://doi.org/10.3724/spj.1035.2010.00020..
Nan F R, Feng J, Han X J, Lv J P, Liu Q, Xie S L. 2016. Molecular identification of Audouinella -like species (Rhodophyta) from China based on three short DNA fragments. Phytotaxa , 246 (2): 107-119, https://doi.org/10.11646/phytotaxa.246.2.2..
Nan F R, Feng J, Xie S L. 2014. Phylogenetic relationship of genus Kumanoa (Batrachospermales, Rhodophyta) based on chloroplast UPA genes. Bulletin of Botanical Research , 34 (1): 584-591, https://doi.org/10.7525/jissn.1673-5102.2014.05.002..
Necchi O Jr, Agostinho D C, Vis M L. 2018. Revision of Batrachospermum section Virescentia (Batrachospermales, Rhodophyta) with the establishment of the new genus, Virescentia stat. nov. . Cryptogamie Algologie , 39 (3): 313-338, https://doi.org/10.7872/crya/v39.iss3.2018.313..
Necchi O Jr, Filho A G, Paiano M O. 2019. Revision of Batrachospermum sections Acarposporophytum and Aristata (Batrachospermales, Rhodophyta) with the establishment of the new genera Acarposporophycos and Visia . Phytotaxa , 395 (2): 51-65, https://doi.org/10.11646/phytotaxa.395.2.1..
Necchi O Jr, Fo A S G, Paiano M O, Vis M L. 2019. Revision of Batrachospermum section Macrospora (Batrachospermales, Rhodophyta) with the establishment of the new genus Montagnia . Phycologia , 58 (6): 582-591, https://doi.org/10.1080/00318884.2019.1624143..
Necchi O Jr, Oliveira M C 2011. Phylogenetic affinities of "Chantransia" stages in members of the Batrachospermales and Thoreales (Rhodophyta). Journal of Phycology , 47 (3): 680-686, https://doi.org/10.1111/j.1529-8817.2011.00997.x..
Necchi O Jr, Sheath R G, Cole K M. 1993a. Systematics of freshwater Audouinella (Acrochaetiacees, Rhodophyta) in North America. 1. The reddish species. Algological Studies , 70 : 11-28..
Necchi O Jr, Sheath R G, Cole K M. 1993b. Systematics of freshwater Audouinella (Acrochaetiacees, Rhodophyta) in North America. 2. The bluish species. Algological Studies , 71 : 13-21..
Necchi O Jr, Zucchi M R. 1995. Systematics and distribution of freshwater Audouinella (Acrochaetiaceae, Rhodophyta) in Brazil. European Journal of Phycology , 30 (3): 209-218, https://doi.org/10.1080/09670269500650991..
Necchi O Jr, Zucchi M R. 1997. Audouinella macrospora (Acrochaetiaceae, Rhodophyta) is the chantransia stage of Batrachospermum (Batrachospermaceae). Phycologia , 36 (3): 220-224, https://doi.org/10.2216/i0031-8884-36-3-220.1..
Posada D, Buckley T R. 2004. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Systematic Biology , 53 (5): 793-808, https://doi.org/10.1080/10635150490522304..
Pueschel C M, Saunders G W, West J A. 2001. Affinities of the freshwater red alga Audouinella macrospora (Florideophyceae, Rhodophyta) and related forms based on SSU rRNA gene sequence analysis and pit plug ultrastructure. Journal of Phycology , 36 (2): 433-440, https://doi.org/10.1046/j.1529-8817.2000.99173.x..
Ronquist F, Huelsenbeck J P. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics , 19 (12): 1 572-1 574, https://doi.org/10.1093/bioinformatics/btg180..
Salomaki E D, Kwandrans J, Eloranta P, Vis M L. 2014. Molecular and morphological evidence for Sheathia gen. nov. (Batrachospermales, Rhodophyta) and three new species. Journal of Phycology , 50 (3): 526-542, https://doi.org/10.1111/jpy.12179..
Saunders G W. 1993. Gel purification of red algal genomic DNA: an inexpensive and rapid method for the isolation of polymerase chain reaction-friendly DNA. Journal of Phycology , 29 (2): 251-254, https://doi.org/10.1111/j.0022-3646.1993.00251.x..
Saunders G W. 2005. Applying DNA barcoding to red macroalgae: a preliminary appraisal holds promise for future applications. Philosophical Transactions of the Royal Society B : Biological Sciences , 360 (1462): 1 879-1 888, https://doi.org/10.1098/rstb.2005.1719..
Sheath R G. 1984. The biology of freshwater red algae. In : Round F E, Chapman D J eds. Progress in Phycological Research, vol. 3. Biopress Ltd, Bristol, UK. p. 89-157.
Sherwood A R, Presting G G. 2007. Universal primers amplify a 23S rDNA plastid marker in eukaryotic algae and cyanobacteria. Journal of Phycology , 43 (3): 605-608, https://doi.org/10.1111/j.1529-8817.2007.00341.x..
Shi Z X. 2006. Flora Algarum Sinicarum Aquae Dulci, Tomus XⅢ, Rhodophyta, Phaeophyta. Science Press, Beijing, China. p. 1-77. (in Chinese)
Skuja H. 1934. Untersuchungen über die Rhodophyceen des Süsswassers. Botanisches Centralblatt, Beiheft , 52 : 173-192..
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution , 28 (10): 2 731-2 739, https://doi.org/10.1093/molbev/msr121..
Thompson J D, Gibson T J, Plewniak F, Jeanmougin F, Higgins D G. 1997. The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research , 25 (24): 4 876-4 882, https://doi.org/10.1093/nar/25.24.4876..
Vis M L, Entwisle T J, West J A, Ott F D. 2006. Ptilothamnion richardsii (Rhodophyta) is a Chantransia stage of Batrachospermum. European Journal of Phycology , 41 (1): 125-130, https://doi.org/10.1080/09670260500418504..
Vis M L, Necchi O Jr, Chiasson W B, Entwisle T J. 2012. Molecular phylogeny of the genus Kumanoa (Batrachospermales, Rhodophyta). Journal of Phycology , 48 (3): 750-758, https://doi.org/10.1111/j.1529-8817.2012.01141.x..
Vis M L, Saunders G W, Sheath R G, Dunse K, Entwisle T J. 1998. Phylogeny of the Batrachospermales (Rhodophyta) inferred from rbc L and 18S ribosomal DNA gene sequences. Journal of Phycology , 34 (2): 341-350, https://doi.org/10.1046/j.1529-8817.1998.340341.x..
Vis M L, Sheath R G. 1997. Biogeography of Batrachospermum gelatinosum (Batrachospermales, Rhodophyta) in North America based on molecular and morphological data. Journal of Phycology , 33 (3): 520-526, https://doi.org/10.1111/j.0022-3646.1997.00520.x..
Xie S L, Shi Z X. 2003. Thorea (Thoreaceae, Rhodophyta) in China. Acta Hydrobiologica Sinica , 27 (6): 631-634. (in Chinese with English abstract).
Xie S L. 2001. Studies on Batrachospermales (Rhodophyta) from China. Doctoral dissertation, Institute of Hydrobiology, Chinese Academy of Sciences. (in Chinese with English abstract)
Zucchi M R, Necchi O Jr. 2003. Blue-greenish acrochaetioid algae in freshwater habitats are "Chantransia" stages of Batrachospermales sensu lato (Rhodophyta). Cryptogamie Algologie , 24 (2): 117-131..
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