Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China

Xiaoyue SONG; Jiangning ZENG; Yi ZHOU; Quanzhen CHEN; Hongsheng YANG; Lu SHOU; Yibo LIAO; Wei HUANG; Ping DU; Qiang LIU

doi:10.1007/s00343-019-9177-7

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Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China

Ecology | Updated：2023-05-20

- Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China
- Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China
- 海洋湖沼学报（英文） 2021年39卷第1期页码：185-197
- Affiliations：
  
  1.Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou 310012, China
  2.CAS Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China
  3.Laboratory for Marine Ecology and Environmental Science, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266237, China
- Author bio：
  
  Jiangning ZENG, zjn@sio.org.cn
- Funds：
  
  the Scientific Research Fund of the Second Institute of Oceanography, Ministry of Natural Resources (MNR)(JB1906);the Scientific Research Fund of the Second Institute of Oceanography, SOA(JG1616);the Scientific Research Fund of the Second Institute of Oceanography, Ministry of Natural Resources (MNR)(JG1910);the Zhejiang Qingshan Lake Innovation Platform for Marine Science and Technology(2017E80001);the Key Projects of Philosophy and Social Sciences Research, Ministry of Education(18JZD059);the National Key Technology Research and Development Program of the Ministry of Science and Technology of the China(2015BAD08B01);the State Key Laboratory of Satellite Ocean Environment Dynamics(SOEDZZ1902);the National Natural Science Foundation of China(41806136);the Project of Long Term Observation and Research Plan in the Changjiang Estuary and the Adjacent East China Sea(LORCE, 14282);© Chinese Society for Oceanology and Limnology, Science Press and Springer-Verlag GmbH Germany, part of Springer Nature 2021
- DOI：10.1007/s00343-019-9177-7
  中图分类号：
- 收稿：2019-07-12，
  
  录用：2019-9-16，
  
  网络首发：2019-12-29，
  
  纸质出版：2021-01
- Accepted：
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Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China[J]. 海洋湖沼学报（英文）, 2021,39(1):185-197.

Xiaoyue SONG, Jiangning ZENG, Yi ZHOU, et al. Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China[J]. Journal of Oceanology and Limnology, 2021, 39(1): 185-197.
Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China[J]. 海洋湖沼学报（英文）, 2021,39(1):185-197. DOI： 10.1007/s00343-019-9177-7.

Xiaoyue SONG, Jiangning ZENG, Yi ZHOU, et al. Partial function prediction of sulfate-reducing bacterial community from the rhizospheres of two typical coastal wetland plants in China[J]. Journal of Oceanology and Limnology, 2021, 39(1): 185-197. DOI： 10.1007/s00343-019-9177-7.

摘要

Abstract

Sulfate-reducing bacteria (SRB) are ubiquitous anaerobic microorganisms that play significant roles in the global biogeochemical cycle. Coastal wetlands

one of the major habitats of SRB

exhibit high sulfate-reducing activity and thus play significant roles in organic carbon remineralization

benthic geochemical action

and plant-microbe interactions. Recent studies have provided credible evidence that the functional rather than the taxonomic composition of microbes responds more closely to environmental factors. Therefore

in this study

functional gene prediction based on PacBio single molecular real-time sequencing of 16S rDNA was applied to determine the sulfate-reducing and organic substrate-decomposing activities of SRB in the rhizospheres of two typical coastal wetland plants in North and South China:

Zostera japonica

and

Scirpus mariqueter

. To this end

some physicochemical characteristics of the sediments as well as the phylogenetic structure

community composition

diversity

and proportions of several functional genes of the SRB in the two plant rhizospheres were analyzed. The

Z. japonic

a meadow had a higher dissimilatory sulfate reduction capability than the

S. mariqueter

-comprising saltmarsh

owing to its larger proportion of SRB in the microbial community

larger proportions of functional genes involved in dissimilatory sulfate reduction

and the stronger ability of the SRB to degrade organic substrates completely. This study confirmed the feasibility of applying microbial community function prediction in research on the metabolic features of SRB

which will be helpful for gaining new knowledge of the biogeochemical and ecological roles of these bacteria in coastal wetlands.

关键词

Keywords

references

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