

FOLLOWUS
1.Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou 310012, China
2.Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai 519082, China
3.School of Oceanography, Shanghai Jiao Tong University, Shanghai 200030, China
wangsio@sio.org.cn
Received:19 October 2022,
Accepted:26 December 2022,
Online First:08 February 2023,
Published:03 January 2024
Scan QR Code
YUAN Chongzhen,WANG Chunsheng,ZHANG Dongsheng.Research Paper ,Benthodytes,occidentpalauta sp. nov., a new species of deep-sea holothuroid (Elasipodida: Psychropotidae) from the west of Kyushu-Palau Ridge in the Western Pacific Ocean[J].Journal of Oceanology and Limnology,2024,42(01):252-262.
YUAN Chongzhen,WANG Chunsheng,ZHANG Dongsheng.Research Paper ,Benthodytes,occidentpalauta sp. nov., a new species of deep-sea holothuroid (Elasipodida: Psychropotidae) from the west of Kyushu-Palau Ridge in the Western Pacific Ocean[J].Journal of Oceanology and Limnology,2024,42(01):252-262. DOI: 10.1007/s00343-023-2344-x.
Benthodytes
occidentpalauta
sp. nov. was collected from the Kyushu-Palau Ridge at a depth of 5 481 m in 2021. This new species is characterized by a gelatinous body wall
violet skin
six pairs of dorsal papillae
and a rough mid-ventral surface without tube feet. The dorsal deposits are rod-shaped and tripartite. Two types of papillae deposits as crosses with four arms with central bipartite apophyses. Ventral deposits are rods. Tentacle ossicles are rod-shaped with end protrusions. Gonad deposits are rod-shaped
tripartite
and cross-shaped. The phylogenetic analyses based on cytochrome oxidase subunit 1 (COI) and 16S individually and a concatenated dataset of COI and 16S genes of this species support that
B
.
occidentpalauta
sp. nov. belongs to
Benthodytes
.
Belyaev G M . 1972 . Hadal Bottom Fauna of the World Ocean . Israel Program for Scientific Translations , Jerusalem . 199 p.
Byrne M , Rowe F , Uthicke S . 2010 . Molecular taxonomy, phylogeny and evolution in the family Stichopodidae (Aspidochirotida: Holothuroidea) based on COI and 16S mitochondrial DNA . Molecular Phylogenetics and Evolution , 56 ( 3 ): 1068 - 1081 , https://doi.org/10.1016/j.ympev.2010.04.013 https://doi.org/10.1016/j.ympev.2010.04.013 . https://do 10.1016/j.ympev.2010.04.013 http://dx.doi.org/10.1016/j.ympev.2010.04.013
Gebruk A V . 2008 . Holothurians (Holothuroidea, Echinodermata) of the northern Mid-Atlantic Ridge collected by the G . O . Sars MAR-ECO expedition with descriptions of four new species . Marine Biology Research , 4 ( 1-2 ): 48 - 60 , https://doi.org/10.1080/17451000701842898 https://doi.org/10.1080/17451000701842898 . https://do 10.1080/17451000701842898 http://dx.doi.org/10.1080/17451000701842898
Hansen B . 1975 . Systematics and biology of the deep-sea Holothurians:1. Elasipoda . Galathea Report : scientific results of the Danish deep-sea expedition round the World 1950 -52. Scandinavian Science Press, Belgium. p . 75 - 96 .
Kalyaanamoorthy S , Minh B Q , Wong T K F et al . 2017 . ModelFinder: fast model selection for accurate phylogenetic estimates . Nature Methods , 14 ( 6 ): 587 - 589 , https://doi.org/10.1038/nmeth.4285 https://doi.org/10.1038/nmeth.4285 . https://do 10.1038/nmeth.4285 http://dx.doi.org/10.1038/nmeth.4285
Katoh K , Standley D M . 2013 . MAFFT multiple sequence alignment software version 7: improvements in performance and usability . Molecular Biology and Evolution , 30 ( 4 ): 772 - 780 , https://doi.org/10.1093/molbev/mst010 https://doi.org/10.1093/molbev/mst010 . https://do 10.1093/molbev/mst010 http://dx.doi.org/10.1093/molbev/mst010
Kimura M . 1980 . A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences . Journal of Molecular Evolution , 16 ( 2 ): 111 - 120 , https://doi.org/10.1007/BF01731581 https://doi.org/10.1007/BF01731581 . https://do 10.1007/bf01731581 http://dx.doi.org/10.1007/bf01731581
Li Y N , Xiao N , Zhang L P et al . 2018 . Benthodytes marianensis , a new species of abyssal elasipodid sea cucumbers (Elasipodida: Psychropotidae) from the Mariana Trench area . Zootaxa , 4462 ( 3 ): 443 - 450 , https://doi.org/10.11646/zootaxa.4462.3.10 https://doi.org/10.11646/zootaxa.4462.3.10 . https://do 10.11646/zootaxa.4462.3.10 http://dx.doi.org/10.11646/zootaxa.4462.3.10
Miller A K , Kerr A M , Paulay G et al . 2017 . Molecular phylogeny of extant Holothuroidea (Echinodermata) . Molecular Phylogenetics and Evolution , 111 : 110 - 131 , https://doi.org/10.1016/j.ympev.2017.02.014 https://doi.org/10.1016/j.ympev.2017.02.014 . https://do 10.1016/j.ympev.2017.02.014 http://dx.doi.org/10.1016/j.ympev.2017.02.014
Nguyen L T , Schmidt H A , Von Haeseler A et al . 2015 . IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies . Molecular Biology and Evolution , 32 ( 1 ): 268 - 274 , https://doi.org/10.1093/molbev/msu300 https://doi.org/10.1093/molbev/msu300 . https://do 10.1093/molbev/msu300 http://dx.doi.org/10.1093/molbev/msu300
Paulay G , Rogacheva A . 2022 . World list of Holothuroidea . In: Bánki O, Roskov Y, Vandepitte L et al. Catalogue of Life Checklist , https://doi.org/10.48580/dfpz-3c7 https://doi.org/10.48580/dfpz-3c7 .
Rogacheva A , Cross I A , Billett D S M . 2009 . Psychropotid holothurians (Echinodermata: Holothuroidea: Elasipodida) collected at abyssal depths from around the Crozet Plateau in the Southern Indian Ocean . Zootaxa , 2096 ( 1 ): 460 - 478 , https://doi.org/10.11646/zootaxa.2096.1.28 https://doi.org/10.11646/zootaxa.2096.1.28 . https://do 10.11646/zootaxa.2096.1.28 http://dx.doi.org/10.11646/zootaxa.2096.1.28
Ronquist F , Teslenko M , Van Der Mark P et al . 2012 . MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space . Systematic Biology , 61 ( 3 ): 539 - 542 , https://doi.org/10.1093/sysbio/sys029 https://doi.org/10.1093/sysbio/sys029 . https://do 10.1093/sysbio/sys029 http://dx.doi.org/10.1093/sysbio/sys029
Talavera G , Castresana J . 2007 . Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments . Systematic Biology , 56 ( 4 ): 564 - 577 , https://doi.org/10.1080/10635150701472164 https://doi.org/10.1080/10635150701472164 . https://do 10.1080/10635150701472164 http://dx.doi.org/10.1080/10635150701472164
Tamura K , Stecher G , Kumar S . 2021 . MEGA11: molecular evolutionary genetics analysis version 11 . Molecular Biology and Evolution , 38 ( 7 ): 3022 - 3027 , https://doi.org/10.1093/molbev/msab120 https://doi.org/10.1093/molbev/msab120 .
Théel H . 1882 . Report on the Holothurioidea. Part I. Report on the Scientific Results of the Voyage of H. M. S. Challenger . Zoology , 4 ( 13 ): 1 - 76 . http://19thcenturyscience.org/HMSC/HMSC-Reports/Zool-13/htm/doc.html http://19thcenturyscience.org/HMSC/HMSC-Reports/Zool-13/htm/doc.html .
Uthicke S , Byrne M , Conand C . 2010 . Genetic barcoding of commercial Bêche‐de‐mer species (Echinodermata: Holothuroidea) . Molecular Ecology Resources , 10 ( 4 ): 634 - 646 , https://doi.org/10.1111/j.1755-0998.2009.02826.x https://doi.org/10.1111/j.1755-0998.2009.02826.x . https://do 10.1111/j.1755-0998.2009.02826.x http://dx.doi.org/10.1111/j.1755-0998.2009.02826.x
WoRMS. 2022 . Benthodytes Théel , 1882 . https://www.marinespecies.org/aphia.php?p=taxdetails&id=123529. Accessed on 2022-09-19 https://www.marinespecies.org/aphia.php?p=taxdetails&id=123529.Accessedon2022-09-19 . https://do 10.1163/2210-7886_asc-41827 http://dx.doi.org/10.1163/2210-7886_asc-41827
Xiao N , Li X M , Sha Z L . 2018 . Psychropotid holothurians (Echinodermata: Holothuroidea: Elasipodida) of the tropical Western Pacific collected by the KEXUE expedition with description of one new species . Marine Biology Research , 14 ( 8 ): 816 - 826 , https://doi.org/10.1080/17451000.2018.1546012 https://doi.org/10.1080/17451000.2018.1546012 . https://do 10.1080/17451000.2018.1546012 http://dx.doi.org/10.1080/17451000.2018.1546012
Xiao N , Gong L , Kou Q et al . 2019 . Psychropotes verrucicaudatus , a new species of deep-sea holothurian (Echinodermata: Holothuroidea: Elasipodida: Psychropotidae) from a seamount in the South China Sea . Bulletin of Marine Science , 95 ( 3 ): 421 - 430 , https://doi.org/10.5343/bms.2018.0041 https://doi.org/10.5343/bms.2018.0041 .
Yu C , Wang C S , Zhang D S et al . 2021 . Benthodytes palauta , a new species of deep-sea holothuroid (Elasipodida: Psychropotidae) from the western Pacific Ocean . Acta Oceanologica Sinica , 40 ( 12 ): 50 - 54 , https://doi.org/10.1007/s13131-021-1937-5 https://doi.org/10.1007/s13131-021-1937-5 .
Yu C , Zhang D S , Zhang R Y et al . 2022 . New psychropotid species (Echinodermata, Holothuroidea, Elasipodida) of the Western Pacific with phylogenetic analyses . ZooKeys , 1088 : 99 - 114 , https://doi.org/10.3897/zookeys.1088.69141 https://doi.org/10.3897/zookeys.1088.69141 . https://do 10.3897/zookeys.1088.69141.figure5 http://dx.doi.org/10.3897/zookeys.1088.69141.figure5
Zhang D , Gao F L , Jakovlić I et al . 2020 . PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies . Molecular Ecology Resources , 20 ( 1 ): 348 - 355 , https://doi.org/10.1111/1755-0998.13096 https://doi.org/10.1111/1755-0998.13096 . https://do 10.1111/1755-0998.13096 http://dx.doi.org/10.1111/1755-0998.13096
0
Views
4
Downloads
0
CSCD
Publicity Resources
Related Articles
Related Author
Related Institution
京公网安备11010802024621