Transcriptional response of <italic style="font-style: italic">Microcystis aeruginosa</italic> to the recruitment promoting-benthic bacteria

Juan WANG; Yuande PENG; Zhi WANG; Wansheng ZOU; Xianjin PENG; Qisheng SONG

doi:10.1007/s00343-021-0387-4

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Transcriptional response of Microcystis aeruginosa to the recruitment promoting-benthic bacteria

Ecology | Updated：2023-04-27

- Transcriptional response of Microcystis aeruginosa to the recruitment promoting-benthic bacteria
- Journal of Oceanology and Limnology Vol. 40, Issue 1, Pages: 153-162(2022)
- Affiliations：
  
  1.College of Life Sciences, Hunan Normal University, Changsha 410081, China
  2.Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, China
  3.Department of Life Science, Hunan University of Arts and Science, Changde 415000, China
  4.Division of Plant Sciences, University of Missouri, Columbia 65211, MO, USA
- Author bio：
  
  Zhi WANG, E-mail: wangzhispider@hotmail.com
  Wansheng ZOU
- Funds：
- DOI：10.1007/s00343-021-0387-4
  CLC：
- Received：16 October 2020，
  
  Accepted：26 November 2020，
  
  Online First：22 January 2021，
  
  Published：2022-01
- Accepted：
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Juan WANG, Yuande PENG, Zhi WANG, et al. Transcriptional response of Microcystis aeruginosa to the recruitment promoting-benthic bacteria[J]. Journal of Oceanology and Limnology, 2022, 40(1): 153-162.
DOI：

Juan WANG, Yuande PENG, Zhi WANG, et al. Transcriptional response of Microcystis aeruginosa to the recruitment promoting-benthic bacteria[J]. Journal of Oceanology and Limnology, 2022, 40(1): 153-162. DOI： 10.1007/s00343-021-0387-4.

摘要

Abstract

Blooms of

Microcystis aeruginosa

occur frequently in many freshwater ecosystems around the world

but the mechanism of recovery has not been fully understood. In our previous study

three benthic bacterial species (E.sp013

Ba.spD06

and Ba.spD24) were identified capable of promoting the recruitment of

M. aeruginosa

. Here

we further investigated the transcriptional response of

M. aeruginosa

to the benthic bacteria in early phase of recruitment by means of RNA-Seq analysis. In total

5 803 803 unigenes on average length of 404 bp were obtained from the transcriptome of

M. aeruginosa

. There were 54 982 unigenes identified as benthic bacteria-responsive unigenes based on the expression level analysis. Results of the protein-protein interaction analysis (PPI) show that the hub genes of the benthic bacteria responsive unigenes mediated network were ribosomal proteins of 30S and 50S

and the most significant functional module of the network was related to the ribosome. Both the unigenes encoding the translation initiation factors (IF-2

IF-3) and elongation factors (lepA

fusA

and tufA) were up-regulated to respond benthic bacteria. Therefore

it indicates that the benthic bacteria have a positive influence on activating the ribosome during the early recovery stage of

M. aeruginosa

关键词

Keywords

references

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Transcriptional response of Microcystis aeruginosa to the recruitment promoting-benthic bacteria

DOI：10.1007/s00343-021-0387-4

摘要

Abstract

关键词

Keywords

references