Comparative transcriptomic analysis of <italic style="font-style: italic">Macrobrachium nipponense</italic> in response to <italic style="font-style: italic">Aeromonas veronii</italic> or <italic style="font-style: italic">Staphylococcus aureus</italic> infection

Chong HAN; Zhipeng ZHANG; Qiang LI; Qinghua CHEN; Jianrong HUANG

doi:10.1007/s00343-021-0364-y

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Comparative transcriptomic analysis of Macrobrachium nipponense in response to Aeromonas veronii or Staphylococcus aureus infection

Aquaculture and Fisheries | Updated：2023-04-27

- Comparative transcriptomic analysis of Macrobrachium nipponense in response to Aeromonas veronii or Staphylococcus aureus infection
- Journal of Oceanology and Limnology Vol. 40, Issue 1, Pages: 347-359(2022)
- Affiliations：
  
  1.State Key Laboratory of Biocontrol, Institute of Aquatic Economic Animals and Guangdong Provincial Key Laboratory for Aquatic Economic Animals, School of life Sciences, Sun Yat-Sen University, Guangzhou 510275, China
  2.Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai 519082, China
  3.School of life Sciences, Guangzhou University, Guangzhou 510006, China
  4.South China Institute of Environmental Science, MEE, Guangzhou 510610, China
- Author bio：
  
  Jianrong HUANG, E-mail: lsshjr@mail.sysu.edu.cn
- Funds：
- DOI：10.1007/s00343-021-0364-y
  CLC：
- Received：29 September 2020，
  
  Accepted：22 January 2021，
  
  Online First：15 February 2021，
  
  Published：2022-01
- Accepted：
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Chong HAN, Zhipeng ZHANG, Qiang LI, et al. Comparative transcriptomic analysis of Macrobrachium nipponense in response to Aeromonas veronii or Staphylococcus aureus infection[J]. Journal of Oceanology and Limnology, 2022, 40(1): 347-359.
DOI：

Chong HAN, Zhipeng ZHANG, Qiang LI, et al. Comparative transcriptomic analysis of Macrobrachium nipponense in response to Aeromonas veronii or Staphylococcus aureus infection[J]. Journal of Oceanology and Limnology, 2022, 40(1): 347-359. DOI： 10.1007/s00343-021-0364-y.

摘要

Abstract

Macrobrachium nipponense

is an economically important freshwater prawn that is often threatened by many aquatic pathogens. In this study

comparative transcriptomic analysis was firstly used to explore the transcriptional response of

M. nipponense

Aeromonas veronii

Staphylococcus aureus

stimulation. A total of 400.19 million clean reads were obtained and assembled into 56 944 unigenes with an average length of 1 253 bp. A total of 1 857 differentially expressed genes were found after

A. veronii

infection

including 677 genes that were up-regulated and 1 180 genes that were down-regulated

while 1 061 significant differentially expressed genes were identified after

S. aureus

infection

including 390 up-regulated and 671 down-regulated genes. Many immune-related genes including Spaetzle

prophenoloxidase activating factor

C-type lectin

anti-lipopolysaccharide factor

and inhibitor of apoptosis 2 protein were commonly up-regulated after

A. veronii

S. aureus

infection. This study will enrich our understanding of the immune response to gram-positive and gram-negative bacteria infection in crustaceans.

关键词

Keywords

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Comparative transcriptomic analysis of Macrobrachium nipponense in response to Aeromonas veronii or Staphylococcus aureus infection

DOI：10.1007/s00343-021-0364-y

摘要

Abstract

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