Construction of the first high-density genetic map for growth related QTL analysis in <italic style="font-style: italic">Ancherythroculter nigrocauda</italic>

Yanhong SUN; Pei LI; Guiying WANG; Renli SUN; Jian CHEN; Qi ZHOU; Jingou TONG; Qing LI

doi:10.1007/s00343-020-9290-7

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Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda

Aquaculture and Fisheries | Updated：2023-05-20

- Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda
- Journal of Oceanology and Limnology Vol. 39, Issue 3, Pages: 1118-1130(2021)
- Affiliations：
  
  1.Fisheries Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan 430207, China
  2.Wuhan Xianfeng Aquaculture Technology Co. Ltd., Wuhan 430207, China
  3.Wuhan Academy of Agricultural Sciences, Wuhan 430207, China
  4.State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China
- Author bio：
  
  Jingou TONG, E-mail: jgtong@ihb.ac.cn
  Qing LI, E-mail: xfsckj@163.com
- Funds：
- DOI：10.1007/s00343-020-9290-7
  CLC：
- Received：20 November 2019，
  
  Accepted：26 January 2020，
  
  Online First：04 June 2020，
  
  Published：2021-05
- Accepted：
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Yanhong SUN, Pei LI, Guiying WANG, et al. Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda[J]. Journal of Oceanology and Limnology, 2021, 39(3): 1118-1130.
DOI：

Yanhong SUN, Pei LI, Guiying WANG, et al. Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda[J]. Journal of Oceanology and Limnology, 2021, 39(3): 1118-1130. DOI： 10.1007/s00343-020-9290-7.

摘要

Abstract

Ancherythroculter nigrocauda

is a fish endemic to the upper areas of the Changjiang (Yangtze) River in China. Quantitative trait locus (QTL) mapping is a powerful tool to identify potential genes affecting traits of economic importance in domestic animals. In this study

a high-density genetic map was constructed with 5 901 single nucleotide polymorphism (SNP) makers by sequencing 92 individual fish from a F1 family using the specific-locus amplified fragment sequencing approach. Initially

48 QTLs for total length

body length

body height

and body weight were identified according to the high density of the genetic map with 24 LGs

a total length of 3 839.4 cM

and marker spacing of about 0.82 cM. These QTLs explained 27.1%-49.9% of phenotypic variance. The results of this study suggest that major QTLs are responsible for the growth of

nigrocauda

and these are potentially useful in comparative genomics research

genome assembly

and marker-assisted breeding programs for this species.

关键词

Keywords

references

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Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda

DOI：10.1007/s00343-020-9290-7

摘要

Abstract

关键词

Keywords

references