Microbiota characteristics in <italic style="font-style: italic">Sebastes schlegelii</italic> intestine in early life stages

Yan JIANG; Xuezhou LIU; Yongjiang XU; Bao SHI; Bin WANG

doi:10.1007/s00343-019-9011-2

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Microbiota characteristics in Sebastes schlegelii intestine in early life stages

Aquaculture and Fisheries | Updated：2023-04-27

- Microbiota characteristics in Sebastes schlegelii intestine in early life stages
- Journal of Oceanology and Limnology Vol. 38, Issue 1, Pages: 275-287(2020)
- Affiliations：
  
  1.Key Laboratory of Sustainable Development of Marine Fisheries, Ministry of Agriculture and Rural Affairs, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China
  2.Laboratory for Marine Fisheries and Food Production Processes, Pilot National Laboratory for Marine Science and Technology(Qingdao), Qingdao 266237, China
- Author bio：
  
  LIU Xuezhou, liuxz@ysfri.ac.cn
- Funds：
- DOI：10.1007/s00343-019-9011-2
  CLC：
- Received：29 January 2019，
  
  Accepted：03 April 2019，
  
  Online First：03 May 2019，
  
  Published：2020-01
- Accepted：
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Yan JIANG, Xuezhou LIU, Yongjiang XU, et al. Microbiota characteristics in Sebastes schlegelii intestine in early life stages[J]. Journal of Oceanology and Limnology, 2020, 38(1): 275-287.
DOI：

Yan JIANG, Xuezhou LIU, Yongjiang XU, et al. Microbiota characteristics in Sebastes schlegelii intestine in early life stages[J]. Journal of Oceanology and Limnology, 2020, 38(1): 275-287. DOI： 10.1007/s00343-019-9011-2.

摘要

Abstract

The structure of intestinal microbiota of black rockfish

Sebastes schlegelii

in five early development stages were determined in high throughput sequencing with Illumina MiSeq PE300 system. The relationship between intestinal microbial community and the environmental (including culture water and feed) microbiota and the abundance variation trends of core microbiota were investigated

based on which the source of some core microbiota was analyzed in this study. The results show that Proteobacteria and Firmicutes are the most dominant phyla in guts. At the genus level

there are obvious differences between the artificial breeding fish and wild adults in the intestinal microflora structure. The compositions of dominant genera are similar

although the structure of intestinal microbiota gradually changes with the growth of larvae and juveniles. The core microbiota including

Bacillus

Acinetobacter

Pseudomonas

Lactobacillus

Lactococcus

Glaciecola

Vibrio

Pseudoalteromonas

Acidovorax

and

Aliivibrio

were determined in the analysis of dominant and shared species. Compared with the water

the effect of feed microbiota on the structure of the gut microbial community is more obvious. Moreover

the trends of

Bacillus

Acinetobacter

Pseudomonas

Lactobacillus

Lactococcus

and

Glaciecola

were opposite to

Vibrio

and

Pseudoalteromonas

in the gut. The correlation analysis suggested that

Acidovorax

Glaciecola

Pseudomonas

Lactobacillus

and

Acinetobacter

might transited from mainly the parents and/or came from the fertilization process. The relative results may provide a theoretical reference for selecting the native probiotics

and supply the basic data for artificially regulating the intestinal microbiota with probiotic during early developmental stage of black rockfish.

关键词

Keywords

references

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Related Author

Chao LI

Min CAO

Haohui YU

Yuan TIAN

Xiaoyan ZHANG

Qi YANG

Ao LI

Luping WANG

Related Institution

Key Laboratory of Mariculture (Ocean University of China), Ministry of Education, Ocean University of China

School of Marine Science and Engineering, Qingdao Agricultural University

Laboratory for Marine Biology and Biotechnology, Pilot National Laboratory for Marine Science and Technology

National and Local Joint Engineering Key Laboratory of Ecological Mariculture, Institute of Oceanology, Chinese Academy of Sciences

Laboratory for Marine Fisheries Science and Food Production Processes, Pilot National Laboratory for Marine Science and Technology

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Microbiota characteristics in Sebastes schlegelii intestine in early life stages

DOI：10.1007/s00343-019-9011-2

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